KEGG   Sus scrofa (pig): 100523886
Entry
100523886         CDS       T01009                                 
Symbol
SF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
  KO
K13095  splicing factor 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100523886 (SF1)
Spliceosome [BR:ssc03041]
 Complex A
  Other components
   Complex A specific factors
    100523886 (SF1)
SSDB
Motif
Pfam: SF1-HH KH_1 zf-CCHC zf-CCHC_5 zf-CCHC_3 KH_5
Other DBs
NCBI-GeneID: 100523886
NCBI-ProteinID: XP_003122635
Ensembl: ENSSSCG00000013021
UniProt: A0A480TKX0
Position
2:7391295..7404693
AA seq 675 aa
MATGANATPLGKLGPPGLPPIPGPKGGFEPGPPPAPGPGAGLLVPGPPPPPPVGSVGALT
AAXPFAALPPPPPPPPPPPPRLPQPPPPPPSPGSSYPPPQPPPPPPLYQRVSPPQPPPPP
PQPPRQDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYI
VQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLI
TEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNA
KIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETP
EDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCK
FQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPASTPLASAPRPAAPANNP
PPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPM
QHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPP
PMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAA
AMARAMRVRTFRAHW
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggcgactggagcgaacgccacgccgctgggtaagctcggcccccccggccttcccccc
atccccggccccaaagggggcttcgagccggggccaccgcctgcccccgggcctggggcg
gggctgctggtgcccgggccgccgccgcccccgcctgtgggctcggtgggggccctgacc
gcggccnttcccttcgcggcgctgcctccgccaccgccgccgccgccgccgccgcccccc
cgcctcccccagccgccgccgccgccgccctccccgggctcctcgtacccaccgccgcag
ccgccccctccgccgccgctctaccagcgcgtgtcgccaccgcagccgccgccgccgcca
ccccagccgccgcgtcaggaccagcagccgggcccggccggcggcggaggagacttccca
agtaagaaacggaagaggagccgctggaaccaagacacaatggaacagaagacagtgatt
ccaggaatgcctacagttatcccccctggacttactcgggaacaagaaagagcttatata
gtgcaactgcagatagaagacctgactcgtaaactgcgcacaggagacctgggcatcccc
cctaaccctgaggacaggtccccttcccctgagcccatctacaatagtgaggggaagcgg
ctcaacactcgggagttccgcacccgcaaaaagctcgaagaggagcggcataacctcatc
acggagatggttgcactcaaccccgactttaagccacctgccgattacaaacccccagca
acacgtgtgagcgataaagtaatgattccgcaagatgagtatccagaaatcaactttgtg
gggctgctcatcgggcccagagggaacactctgaagaacatagagaaggagtgtaacgcc
aagatcatgatccggggcaaaggctctgtgaaggaaggcaaagtcgggcgcaaggatggc
cagatgctgcctggagaggacgagccgcttcacgccctggttactgctaatactatggag
aatgtgaagaaagcagtagaacagataagaaacatcctgaagcagggtattgagactcct
gaggaccagaatgatctgcggaagatgcagctgcgagaattggctcgcttgaacgggacc
cttcgggaagatgataacaggatcttaagaccctggcagagctcagagacccgcagcatt
accaataccacagtgtgtaccaagtgtggaggggctggccacattgcttctgattgcaaa
ttccagaggcctggtgacccccagtcagctcaggataaagcgcggatggataaagagtac
ttgtccctcatggccgaactgggggaggctcctgtgcccgcatctgtgggctccacgtct
gggcctgcctccacgcccctggccagtgcgcctcggcctgctgctcccgccaacaaccca
cctccaccgtctctcatgtccaccacccagagccgcccgccttggatgaattctggccct
tcggagagtcggccctaccacggcatgcacggcggtgggcccggtgggcccggaggtggg
ccccatagcttcccgcacccgttacccagcctgacaggtgggcatggtggacatcccatg
cagcacaaccccaacggacccccacccccgtggatgcagccgccgccgccaccgatgaac
cagggcccccacccacctgggcaccatggccctcctccaatggatcagtacctgggaagt
acgcctgtgggctctggggtctatcgcctgcatcaaggaaaaggtatgatgccgccgcca
cctatgggcatgatgccgccaccgccgccgcctcccagtgggcagcccccgcccccgccc
tctggtcctcttcccccatggcaacagcagcagcagcagcctccgccgccccctccgccc
agcagcagtatggcttccagtacccccttgccatggcagcaaagatccctccccgcagcg
gcgatggcccgagccatgagagtgaggactttccgcgcccattggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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