KEGG   Sus scrofa (pig): 100524569
Entry
100524569         CDS       T01009                                 
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X5
  KO
K11478  protein Jumonji
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03083  Polycomb repressive complex
ssc04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100524569 (JARID2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100524569 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100524569 (JARID2)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100524569 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     100524569 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 100524569
NCBI-ProteinID: XP_005665649
Ensembl: ENSSSCG00000001061
Position
7:11358243..11601715
AA seq 1207 aa
MAAPRVCQVQFLVAYLEEPGIEGLLGNGQSKGLGPASEQSENEKDDASQVSSTSNDVSSS
DFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFL
TFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKTAANNASSSCQSTPRKGKTHKH
VHNGHVFNGSSRSSREKEPVQKHKSKEATPAKEKHSDPRADGRREQASASHPPAAPSTGS
SAKGLAANHHHPPLHRSAQDLRKQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKY
TATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASK
STGHAVNGLKVSGRLNPKSCTKEVGGRQLREGLRNSKRRLEEAPPADKPQSPPKKMKGAA
GAAEGPGRKPASAQAPAPAPAPAPAEKAPPGGHVKKEVPERSLERNRPKRAAAGKGPPGR
QAHSKPDAPCEHRSTSQSEPLPRPHEAAAKAEKGAGRAGWAAMDEIPVLRPSAKEFHDPL
VYIESVRPQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACI
KKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQ
DRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKESLERRKGPLEGHTEQDYNRFHPL
PRFEPKNGLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVAKEEEEDKGILSDFH
KCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTN
THGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRD
QNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLC
REGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRH
IAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYG
SHDGGSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEK
QKSCRGLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCLGKPTPKRGPRKRATVDVPPS
RLAPSSS
NT seq 3624 nt   +upstreamnt  +downstreamnt
atggctgctccacgggtctgtcaggtccagtttttggtggcttatcttgaggaacctggg
atagaagggctccttggtaatggccagtctaagggattaggaccagcatcagaacagtca
gagaatgagaaggacgatgcatcccaagtgtcctcgactagcaacgatgttagttcttca
gattttgaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagttcgct
caatcccagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccc
cctccagctactcaaatctctgacctctctaaaaggaagcctaagacagaagattttctt
acctttctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagc
tctcaggacgaggaggatgtcgaggaggaagatgatgagacagaagacgtcaaaacagcc
gccaacaatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaagcat
gttcacaacggacatgttttcaatggttccagcaggtcatcacgggagaaggaacctgtt
cagaaacacaaaagcaaagaggccactcccgcgaaggagaagcacagcgatccccgggcc
gacggccggagggagcaggcttcggcgagccaccccccagcggccccctccacgggctcc
tcggccaaggggctcgccgctaaccaccaccacccgcctctgcatcggtcggctcaggac
ttacggaagcaggtttctaaggtcaacggagtcactcgaatgtcatctctgggtacaagt
gcaaccagtgccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtac
actgcaacggtgacgaaggggactgtcacatacaccaaagccaagagagaactggtcaag
gaaaccaaacccaatcaccacaagcccagttcagctgtcaaccacacaatctcagggaaa
actgaaagtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaag
tccaccgggcacgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgc
actaaggaggtgggggggcggcagctgcgggaggggctgcggaactccaagcgcaggctg
gaagaggcgcccccggccgacaagccgcagtcacccccgaagaagatgaagggggcggcg
ggtgctgccgagggccccggcaggaagccggcctcagcccaggccccggccccagccccg
gccccagcccctgccgagaaggcgccgcctggcggccacgtgaagaaggaggtgcccgag
cggagcctggagaggaaccggccgaagcgggcagcggccggcaagggcccgccgggcaga
caagcacacagcaagccggacgccccctgtgaacatcgttctacctcgcaatcggagccc
ctgccccggccgcacgaggcggcggccaaggccgagaagggggccggccgggccgggtgg
gcggccatggacgagatccccgtactgcggccgtcggccaaggagttccacgacccgctc
gtctacatcgagtcggtgcgccctcaggtggagaagtacggcatgtgcagggtgatcccg
cccccggactggcggcccgagtgcaagctcaacgacgagatgcgcttcgtcacgcagatc
cagcacatccacaagctgggccggcgctggggccccaacgtgcagcggctggcctgcatc
aagaagcacctcagatctcagggcatcaccatggacgagctcccgctcataggaggctgt
gagctcgacctggcctgctttttccggctgattaacgagatgggcggcatgcagcaagtg
actgacctcaaaaagtggaacaaactagcagacatgctgcgcatccccaaaaccgcccag
gaccggctggccaagctccaggaggcctactgccagtacctgctctcctacgactccctg
tcccccgaggagcaccggcgcctggagaaggaggtgctcatggagaaggagagcctggag
cggcgcaaggggcccctggagggccacacggagcaggactacaaccgcttccacccgctg
ccccgcttcgagcccaagaacgggctcatcaacggcgtggcccacaggaacggcttccgc
agcaagctgaaggaggtgggccccgcgcagctcaagacgggccggcggagactctttgct
caggaaaaggaggtggcgaaggaggaggaggaggacaaaggcatcctcagcgacttccac
aagtgcatatacaagggaagatctgtttctttaacgactttttaccgaacagctagaaat
atcatgaacatgtgcttcagcaaggagccggcccccgcggagatcgagcaagagtactgg
aggcttgtggaggagaaggactgccacgtggctgtgcactgcggcaaagtggacaccaac
acgcacggcagcggcttcccggtggggaaatcagagcccttttcaagacacggatggaac
ctcaccgtcctccccaataacacaggctccatcctgcgtcacctcggtgctgtgcctgga
gtgacaattccctggctgaacatcggcatggtcttttctacctcatgctggtctcgagac
caaaaccaccttccctacatcgactacttacacactggtgctgactgcatttggtattgc
attcctgctgaggaggagaacaagctcgaggacgtggtgcacaccctgctccaagccaac
ggcacgccgggcctgcagatgctcgagagcaacgtcatgatctccccggaggtgctgtgc
agagagggggtcaaggtgcacagggcggtgcagcagagtggccagttcgttgtctgcttc
ccggggtccttcgtgtccaaagtgtgctgcggctacagcgtctcagagaccgtgcacttc
gccaccacccagtggacgagtatgggcttcgagacggccaaggaaatgaagcgtcgccat
atagccaagccattctccatggagaagttgctctaccagatcgcacaagcggaagcgaaa
aaggaaaatggtcccactctcagtaccatctcggcccttctggacgagctcagggatacg
gagctgcggcagcgccggcagctgttcgaggctggcctccactcctccgcccgctacggc
agccacgacggcggcagcgccgcgcccgacggcaagaagaagcctcggaagtggctgcag
ctggagacctcggagcgacggtgtcaggtgtgccagcacctgtgctacctgtccatggtc
gtgcaggagaacgagaacgtggtcttctgcctggagtgcgccctgcgccacgtggagaag
cagaagtcctgccggggcctgaagctgatgtaccgttacgacgaggaacaaatcatcagc
ctggtcaatcagatctgtggcaaagtatctggtaaaaacggcagcattgagaactgtctc
ggtaaacccacaccaaaaagagggccccgcaagagagccacggtggacgtgccgccctcc
cggctcgcaccctcctcttcgtga

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