KEGG   Sus scrofa (pig): 100525583
Entry
100525583         CDS       T01009                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00310  Lysine degradation
ssc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100525583 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100525583 (PLOD1)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     100525583 (PLOD1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100525583 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 100525583
NCBI-ProteinID: XP_003127625
Ensembl: ENSSSCG00000003433
UniProt: A0A480M584 A0A4X1W845
Position
6:71987938..72019712
AA seq 725 aa
MRLLLLLAPLGWLLLTETKGDAKPEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQALGL
GEDWNEKEASSGGGLKVRLLKKALEKHADENLVILFTDSYDVVFASGPRELLKKFRQAKS
QVVFSAEELIYPDRRLEAKYPAVSDGKRFLGSGGFIGYAPNLSKLVAEWEGQDSDSDQLF
YTKIFLDPEKRERINITLDHRCRIFQNLDGALDEVVLKFEMGQVRARNLAYDTLPVLIHG
NGPTKLQLNYLGNYIPRFWTFETGCSVCDEGLRSLKGIGDEALPTVLVGLFIEQPTPFLS
LFFQRLLRLQYPRKRMRLFIHNHEQHHKALVEQFLAEHGDEYQSVKLVGPEVRVANADAR
NMGADLCRQDRSCTYYFSVDADVALTEPKTLRLLIEQNKNVLAPLMTRHGRLWSNFWGAL
SADGYYARSEDYVDIVQGRRVGVWNVPYISNVYLIKGSALRAELQQTDLFHHSKLDPDMA
FCANIRQQDVFMFLTNRHAFGHLLSLDSYQTTHLHNDLWEVFSNPEDWKEKYIHENYTKA
LAGKLVETPCPDVYWFPIFTETACDELVEEMEHYGQWSLGDNKDNRIQGGYENVPTIDIH
MNQISFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDASTF
TINIALNRVGVDYEGGGCRFLRYNCSIRAPRKGWTLMHPGRLTHYHEGLPTTKGTRYIAV
SFVDP
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgcggctcctgctacttctggccccactgggctggctgcttctgaccgaaacgaagggt
gacgccaaaccggaggacaacctcttggtgctcacggtggccacgaaggagaccgagggg
ttccgacgcttcaagcgctcagcccagttcttcaactacaagatccaggcgctgggactg
ggggaggactggaatgagaaggaggcatcgtcgggtggagggctgaaggttcggctgctg
aagaaagccctggaaaagcatgcagacgagaacctggtcattctcttcacagacagctat
gacgtggtgtttgcctccgggccccgagagctgctgaagaagttccggcaggccaagagc
caggtggtcttctcggcagaggagctcatctacccggaccgcaggctggaggccaagtac
ccggccgtctccgacggcaagaggttcctgggctctggaggcttcattggttatgccccc
aacctcagcaaactggtggctgagtgggagggtcaggacagcgacagcgaccaactcttt
tataccaagatcttcttggacccagagaagagggagcggatcaatatcaccttggaccac
cgctgccgtatcttccagaatctggatggagccttggatgaggtcgtgctcaagttcgag
atgggccaagtgagagcgaggaacctggcctacgacaccctcccggtcctgattcacggc
aatgggcccaccaagctgcagctgaactacctgggcaactacatcccgcgcttctggacc
ttcgagacggggtgctctgtgtgtgatgagggcctgcgcagcctcaagggcattggggat
gaagctctgcccacagtcctggtcggcctgttcatcgaacagcccacgccgttcctgtcc
ctgttcttccagcggctcctgcgcctccaatacccccggaaacggatgcggcttttcatt
cacaaccatgagcagcaccacaaggctctagtggagcagttcctggcagagcatggcgac
gagtaccagtccgtgaaactggtgggccctgaggttcgggtggcgaacgctgacgccagg
aacatgggcgcggacttgtgccggcaggaccgtagctgcacctactacttcagcgtggat
gccgacgtggccctgactgagcccaaaaccctgcggctgctgatcgagcagaacaagaac
gtccttgcccccttgatgacccgccacgggaggctgtggtcgaacttctggggggcactg
agtgcagatggctactacgcccgctctgaggactacgtggacatcgtgcaggggcggcgt
gttggcgtctggaatgtgccctacatctcgaacgtgtacctgatcaagggcagtgccctg
cgggctgaactgcagcagacagacctgttccaccacagcaagctggaccccgacatggcc
ttctgtgccaatatccggcagcaggacgtgttcatgttcctgaccaaccggcacgccttt
ggccacctgctctccctggacagctaccagaccacccacctccacaacgacctctgggag
gtgttcagcaatcccgaggactggaaggagaaatacatccacgagaactacaccaaggcc
ctggcggggaagctggtggagacgccatgcccagacgtctactggttccccatcttcacc
gagacggcctgtgacgagctggtggaggaaatggagcactacggccagtggtctctggga
gacaacaaggacaaccgcatccagggtggctacgaaaacgtgccaaccatcgacatccac
atgaaccagatcagctttgagcgggagtggcacaagttcctggtggagtacatcgccccc
atgacagagaagctctacccgggctactacaccagggcccagttcgacctggcctttgtt
gtccgctacaagccagatgagcagccctcgctgatgccacaccacgacgcctccaccttc
accatcaacattgccctgaatcgggtcggggtggattacgagggcggaggctgtcgcttc
ctgcgctacaactgctccatccgagcgccacggaaaggctggaccctcatgcaccctggg
cgactcacgcactaccacgaggggctccccaccaccaaaggcacccgctacatcgccgtc
tccttcgtcgatccctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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