KEGG   Sus scrofa (pig): 100620235
Entry
100620235         CDS       T01009                                 
Symbol
POLR2G
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03020  RNA polymerase
ssc03420  Nucleotide excision repair
ssc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100620235 (POLR2G)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100620235 (POLR2G)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100620235 (POLR2G)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100620235 (POLR2G)
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100620235 (POLR2G)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100620235 (POLR2G)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100620235 (POLR2G)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100620235 (POLR2G)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100620235 (POLR2G)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 100620235
NCBI-ProteinID: XP_013849657
Ensembl: ENSSSCG00000025571
UniProt: A0A4X1VKG7
Structure
Position
2:complement(9004388..9008631)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctaccatatctccctggagcacgagatcctgctgcatccgcgctacttcggcccc
aaccttcttaacaccgtgaaacaaaagctcttcactgaagtggaggggacctgcaccggc
aagtatggctttgtaattgctgtcaccaccattgacaatatcggtgctggtgtgatccag
ccaggccgaggctttgtcctttatccagttaagtacaaggccatcgttttccggcccttt
aaaggggaggtcgtggatgctgttgtcactcaagtcaacaaggtcggactcttcacagaa
attgggcccatgtcctgcttcatctctcgacattccatcccatcagagatggaatttgat
cctaattccaacccaccatgttacaagacaatggatgaggacattgtgattcagcaggat
gatgagattcgcctgaagattgttgggacccgtgtggacaagaatgacatctttgctatt
ggctccctgatggatgattacttggggcttgtgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (22)   
   PDB (22)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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