KEGG   Sus scrofa (pig): 100622617
Entry
100622617         CDS       T01009                                 
Symbol
GABRA2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X2
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04727  GABAergic synapse
ssc04742  Taste transduction
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100622617 (GABRA2)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100622617 (GABRA2)
   04723 Retrograde endocannabinoid signaling
    100622617 (GABRA2)
  09157 Sensory system
   04742 Taste transduction
    100622617 (GABRA2)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100622617 (GABRA2)
   05033 Nicotine addiction
    100622617 (GABRA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100622617 (GABRA2)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100622617 (GABRA2)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 100622617
NCBI-ProteinID: XP_005666685
Ensembl: ENSSSCG00000028922
UniProt: A0A4X1ULV0 A0A8D0W0Z4
Position
8:complement(36344633..36474840)
AA seq 511 aa
MKRKLNISNMQLLLFVFLVWDPARLALANIQEDEAKNNITIFTRILDRLLDGYDNRLRPG
LGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSC
PLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKSPSIKAE
GITLTYNSVKAILQGAKLIWSKYIAFSWPSLIQGKTLEYLEKWMDCITFKQSSKKEKASV
MIQNNAYAVAVANYAPNLSKDPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDRM
SRIVFPVLFGTFNLVYWATYLNREPVLGVSP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaagaggaaactgaacatctccaacatgcagttgctgctttttgttttcttggtgtgg
gacccagccaggttggcgctggctaacatccaagaagatgaggctaaaaataacattacc
atctttacaagaattctagacagacttctggatggttacgataatcggcttagaccagga
ctgggagacagtattactgaagtcttcactaatatctacgtgaccagttttggccccgtc
tcagatacagatatggaatatacaatagatgttttctttcgacaaaaatggaaagatgaa
aggttaaaatttaaaggtcctatgaatatccttcgacttaacaatttaatggccagcaaa
atctggactccagataccttcttccacaatgggaaaaaatcagtagctcataatatgaca
atgccaaataagcttcttcgaatccaggatgatgggactctgctgtatacaatgaggctt
acagttcaagctgaatgtccaatgcacctggaggattttccaatggatgctcactcgtgt
cctctgaaatttggcagctatgcatatacaacctcagaggttacttatatttggacatac
aatgcatctgattctgtgcaagttgctcctgatggctctaggttaaatcagtacgatctg
ctgggccaatcaattgggaaggagacaattaaatccagtacaggtgaatataccgtaatg
acagctcatttccacttgaaaagaaaaattgggtattttgtgattcagacatatctgcct
tgcatcatgactgtcattctctcccaagtgtcattctggcttaacagagaatctgtgcct
gcaagaactgtgtttggagtaacaactgttctaacaatgacaactctaagcatcagtgcc
cggaattctctccccaaagtggcttatgcaactgccatggactggtttattgctgtttgt
tatgcctttgtgttctctgccctaattgaatttgcaactgttaattacttcaccaaaaga
ggatgggcttgggatgggaagagtgtagtaaatgacaagtccccttcaataaaagctgaa
ggcattacattaacatacaactcagtgaaggcaattcttcaaggagctaagctaatatgg
tccaagtatatagctttctcatggcccagtttaatccaaggaaagactttagagtactta
gagaagtggatggactgtataaccttcaaacaatcttctaaaaaagaaaaagcctctgtc
atgatacagaacaatgcttatgccgtggctgttgccaattatgccccgaatctttcaaaa
gacccagttctctccaccatctccaagagtgcaaccacgccagaacccaacaagaagccg
gaaaacaagccagctgaagccaagaaaaccttcaacagtgtcagcaaaattgatagaatg
tctagaatagttttcccagttttgtttggtacatttaatttagtttactgggctacatat
ttaaatagagaacctgtattaggggtcagtccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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