KEGG   Sus scrofa (pig): 100622712
Entry
100622712         CDS       T01009                                 
Symbol
GABRA4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X2
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04727  GABAergic synapse
ssc04742  Taste transduction
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100622712 (GABRA4)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100622712 (GABRA4)
   04723 Retrograde endocannabinoid signaling
    100622712 (GABRA4)
  09157 Sensory system
   04742 Taste transduction
    100622712 (GABRA4)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100622712 (GABRA4)
   05033 Nicotine addiction
    100622712 (GABRA4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100622712 (GABRA4)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100622712 (GABRA4)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD
Other DBs
NCBI-GeneID: 100622712
NCBI-ProteinID: XP_003356954
Ensembl: ENSSSCG00000030515
UniProt: I3LIV9
Position
8:complement(36875649..36943016)
AA seq 554 aa
MVSGKKVPAIATSFGVSFALLHVLCLAACLNESPGPNQKEEKLCPENFTRILDGLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKALQ
EIPAAPVLKEKHPEAPLQNPNANLNMRKRANALVHSESDVGNRTEVGNHSSKSSTVVQGS
SEATPESYLASSPNPFSHANAAETISAARAIPSAPSSTPSRTGYLSQQVPVGSASTQRVF
GSRLGRIKTTVNSIGASGRLAATTPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
YLSKDTMEKSESLM
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggtttctggcaagaaggtacccgcgattgcgacgtccttcggggtcagtttcgccctc
ctgcacgtcctgtgcctggcggcttgtttaaacgaatccccaggaccgaaccaaaaggag
gagaaattatgcccggaaaattttacccgcatcctggacggtttactcgatggttatgac
aacaggctgcgtcctggatttgggggtcctgttactgaagtaaaaaccgatatatatgtc
actagctttggacctgtttctgatgttgaaatggaatacacaatggatgtgttcttcaga
cagacatggattgacaaaagactaaaatatgatggccccattgaaattttgagattgaat
aatatgatggtaacaaaagtatggacccctgatactttcttcaggaatggaaagaaatct
gtctcacataatatgacagctccaaataagctttttagaattatgagaaatggcactatt
ttatacacaatgagactcaccataagtgcagagtgtcccatgagattggtggatttcccc
atggatggccatgcatgtcctttgaaatttgggagttatgcctatccaaagagtgagatg
atctacacctggacaaaaggtcctgagaaatcagtggaagtgccaaaggagtcttctagc
ttagttcaatatgacttgattgggcaaactgtatcaagtgaaactatcaaatccatcacg
ggtgaatatattgttatgacagtttacttccacctcagacggaagatgggttattttatg
attcagacatacattccatgcattatgacagtaattctttctcaagtttccttctggata
aataaggaatcagttccagctaggactgtatttggaataaccacagtcctcaccatgacc
acactgagcatcagtgcacggcattctttgcccaaagtgtcctacgcgactgccatggat
tggttcatagctgtctgctttgcttttgtattttcggcccttattgagtttgctgctgtc
aactactttaccaacattcagatggaaaaagccaaaaggaagacatcaaaagccctccag
gaaattccagctgctccagtgctgaaggaaaagcatcctgaagctcctctgcagaaccca
aatgccaacctgaacatgagaaaaagagcaaatgccttggttcactctgaatctgatgtt
ggcaacagaactgaggtgggaaaccattcgagcaaatcttccacggttgttcaaggatct
tctgaagccacaccagagtcttacttagcttccagtccaaacccattcagccatgcaaat
gcagctgaaactatatctgccgcaagagcaattccatctgctccttcttctactcctagt
agaactgggtatttgtcccagcaagttccagttggatctgcttctacccagcgtgtgttt
ggatcaagactggggcgaattaagaccacagttaatagcataggggcttctgggaggctg
gccgccacgactccctctgctccgccaccttctggatctggcacaagtaaaatagacaaa
tatgcccgcattctctttccagtaacatttggggcatttaatatggtctattgggttgtt
tatttatctaaggatactatggagaaatcagaaagtctaatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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