KEGG   Sus scrofa (pig): 100625100
Entry
100625100         CDS       T01009                                 
Symbol
IFT172
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 172 homolog
  KO
K19676  intraflagellar transport protein 172
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100625100 (IFT172)
Cilium and associated proteins [BR:ssc03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   100625100 (IFT172)
SSDB
Motif
Pfam: WD40 Clathrin ANAPC3 Coatomer_WDAD
Other DBs
NCBI-GeneID: 100625100
NCBI-ProteinID: XP_003354937
Ensembl: ENSSSCG00000026367
UniProt: A0A8D0WSZ9 A0A8D1MVR0
Position
3:111683674..111718504
AA seq 1749 aa
MQLKHLRTLLSPQDGAAKVTCMAWSHNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADM
KYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQW
PAEFIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYF
FDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGREGHVLQTFDYSRDPQE
REFTTAAASPGGQSVVLGSYDRLRVLNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSR
LCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEV
KILGKERYLVAHTSDTLLLGDLATNRLSEVAWQGSGGNEKYFFENENVCMIFNAGELTLV
EYGSNDPLGSVRTEFMNPHLISVRINERRQRGMEDNKKLAYLVDIKTIAIVDLIGGYNIG
TISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQWVPGSDVLVA
QNRNSLCVWYNIEAPERVTMSSIRGDVVGLERGGGKTEVMVTEGVTTVAYTLDEGLVEFG
TAVDDGDYMRATTFLETLEMTPETEAMWKTLSKLSLEAKQLHIAERCFSALGHVAKARFL
RETNEIADQVSQEYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMAMYQELHR
WDECIAVAEAKGHPALENLRRGYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPA
KAARLVLTREELLANTDLVERITAALIKGELYERAGDLFEKIRNPQQALECYCKGNAFMK
AVELARSAFPVEVVRLEEAWXDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAI
YILDLQDRTIAAKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKL
AMKCMRPEDVSALYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFKKHKLYDDMIRLV
GKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAEEWKATVNMYRSSGLWEEAYRVAKA
HGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEFAFELSRLALKHK
TPEIHLRYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPESVA
EVLVGQARGALEEKDFQKAEGLLLRAQRPGLALTFYKEAGLWSDALRICKDYVPGQLEAL
QEEYEREATKKGARGMEGLVEQARQWEQAGEFSRAVYCYLKVRDAGSSGLVEKCWMKAAE
LSIKFLPPQRALEVVRAVGPQLVGIGKHSAAAELYLNLDLVKEAIDAFMEGEEWNKAKHV
AKELDPRYEDYVDQRYKDFLKNQGKVDSLVGVDVVAALDLYVEQGQWDKCIETATKQNYK
ILHKYVALYATHLIREGGYAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNSAEAY
HSWADLRDVLFNLCENLAKSSEANSPAHEEFETMLLIAHYYATRAAAQSVKQLETVAAKL
SXSLLRHTQLLPADKAFYEAGIAAKAVGWENMAFIFLNRFLDLTDAIEEGTLDAIDHSDF
QDTDIPYEVPLPAKQHIPEAQREEVRDWVLTVSMDQRLEQVLPRDERGVYEASLVAASTG
VRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGG
LPSTSFSFQ
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgcagttgaagcacctgaggaccctgctgagccctcaggatggagctgcaaaggtcacc
tgcatggcatggtcccacaacaatgccaaatttgctgtctgcacagtggaccgagtggtg
ttgctgtatgacgaacacggggagcggagggataaattctccaccaaaccagccgacatg
aagtatggcaggaagagctatatggtgaagggcatggctttttctcccgattcaactaag
atcgccataggacagaccgacaacatcatctatgtctacaagattggagaagattggggt
gacaagaaagtcatctgtaacaagttcatccagacgagtgctgttacttgtctgcagtgg
ccagcagaatttatcattgtctttggactggccgaagggaaggtgcgtttagcaaacacc
aagacaaataaatcatctaccatctatgggaccgattcttatgtggtgtcactgacaacc
aattgctctgggaaaggaattctctctggtcatgcagatggcaccattgttaggtatttc
tttgatgatgaaggctcaggagaatcgcaggggaagttggtgaaccacccgtgcccaccc
tatgccttggcctgggccaccaatagcattgtggctgcaggctgcgatcggaggatcgtg
gcctatgggagagaaggccacgtgctccagacctttgactatagccgtgaccctcaggag
cgggagttcaccacagccgccgccagtcctgggggccagtcggttgtgctgggaagttat
gacagacttcgggtgctcaactggagtcctcggagaagcatctgggaagaggcaaagccc
aaggagattgccaacttatacacggtcactgccttggcctggaagcgggacggctcacga
ctctgcgcgggcacactctgcggtggcgtggaacagtttgactgctgcctccgaaggagc
atttacaagaataagtttgagttgacatatgtgggacccagccaggtgatcgtgaagaac
ctctcctcggggacccgggtggtgctcaagtcgcactatggctacgaagtggaagaggtg
aaaatcctgggaaaggaacgttacctggtggcccacacatcagatacactgctgctggga
gacctggccacaaatcgcctcagtgaggtagcctggcagggatctggtggcaatgagaag
tatttctttgaaaatgaaaatgtgtgcatgatcttcaacgcgggagagctgaccctggtg
gagtacgggagtaacgatcccctgggttctgtacgtacggagttcatgaacccccatctc
atcagtgtccgcattaatgagaggcgtcagcgaggaatggaagataataagaaactggct
tatcttgttgatattaagactattgctatagtggatctgattggtggctacaacattggc
accatcagccatgagagccgtgtggattggctggagcttaatgagactggacacaagctt
ctcttcagggaccggaaacttcgtctgcacctgtacgatattgaaagctgctctaagacg
atgatcctcaacttctgctcctacgtgcagtgggtcccgggaagcgatgtgctggtagct
cagaaccgcaacagcttgtgtgtgtggtacaacattgaggcgcctgagcgggtcaccatg
tcctccatcaggggggacgtcgtcggtctggagcggggcgggggaaagaccgaggtgatg
gtgaccgaaggtgtgacgaccgttgcctacacgctggatgagggcctcgttgagtttggc
acagccgtggacgatggcgactacatgcgggcgacaaccttcttggagactctggagatg
accccggaaacagaagcgatgtggaaaaccttgagtaagctgtcgctcgaagcaaagcag
ctacacattgctgagaggtgcttttctgctttgggccatgtggcaaaagctcgatttcta
cgtgagaccaatgagattgcagaccaagtgtctcaggaatatggtggagaaggaacagac
ttttatcaggtccgagcacgtctagccatgctggagaaaaactacaagctggctgagatg
atcttcttggaacagaacgctgtcgaggaggccatggccatgtaccaggagctacatcgc
tgggatgagtgtattgctgtggccgaggccaaggggcacccagccctagagaacctgcgc
cggggctactaccagtggctgatggacactcagcaagaggagcgagcaggtgaacttcag
gagagccaaggggatgggctagcggccatcagcctctacctcaaagccgggctgcctgcc
aaggctgctcggctggtgctgacccgagaggaactgctggccaacacggacctggtggag
cgcatcaccgcagccctcatcaagggcgaactgtatgaaagggcaggcgatctctttgag
aagattcgaaacccacagcaggccctcgagtgctactgtaaaggcaacgcattcatgaaa
gcggtggagctggcccgatcggccttccccgtggaggtggtgagactggaggaggcgtgg
ngggaccacttggtgcagcagaagcagcttgatgcggccatcaaccactacattgaagcc
aggtgctccatcaaggccattgaggccgccctgggcgcccgccagtggaagaaggccatt
tatattttagatctgcaggatcggaccattgcggccaaatactatcctcgtgtggcgcaa
cactacgcttctctgcaggagtacgagattgccgaggagctttacacgaagggagaccgg
accaaagacgccatcgacatgtacacccaggctggccgctgggagcaagcccacaagctg
gcgatgaagtgcatgagaccagaagacgtgtcggcgctgtacatcacccaggcccaggag
atggagaagcagggcaagtaccgagaggctgaaaggctgtatgtgacagtggaagagcca
gatcttgccatcaccatgttcaaaaagcacaagttgtatgacgatatgatccgcctcgta
gggaagcatcacccagatctcctgagtgacacgcacctgcacctgggcaaggagctggag
gccgaaggccgacttcaggaggccgagtatcactacctcgaggccgaggagtggaaggcc
acggtgaacatgtaccggtccagtgggctttgggaagaggcctaccgggtggccaaggct
cacggaggcgcaaacgcccacaaacacgtggcttacctgtgggcgaagagcctgggagga
gaggctgcagttaggctgctcaataagctgggactcttggaagctgctattgaccacgct
gccgacaactgctcctttgaattcgcttttgaactctctcggctggccctcaagcacaaa
accccggagattcatctcagatacgctatgtacctggaggacgaggggaaatttgaagag
gcagaagctgagttcatcagggccggtaaacccaaggaagccgtcctcatgtttgtccat
aaccaggactgggaggcagctcagcgcgtggccgaggctcacgacccggagagcgtcgcc
gaggtgctcgtggggcaggcccggggggccttggaggagaaggacttccagaaagcagaa
gggctgctgcttcgggcccagaggccgggcctggccctcaccttctacaaggaggctggg
ttgtggagcgatgccctgcggatctgcaaggactacgtgcctggccagctggaggctctg
caggaagagtatgagcgggaagctactaagaagggggccaggggcatggaggggctggtg
gaacaagcacggcagtgggagcaggccggagagttcagccgcgcggtctactgctacctc
aaggtgcgggatgcgggaagcagcggcctggtggagaagtgctggatgaaggcagccgaa
ctctccatcaagtttctgcctccccagcgcgccctggaggtagtgcgggccgtggggccc
cagctggttggaatcggcaagcacagtgcagctgcagagctctatctgaacctggacctc
gtcaaggaagcgatcgacgcgttcatggagggtgaggagtggaacaaggccaagcatgtg
gccaaggagttagatccccggtatgaagactatgtggaccagcgttataaggacttcctc
aagaaccagggcaaggtggactcgctggtgggtgtggatgtggtggctgctctggaccta
tacgtggagcagggccagtgggacaagtgcatcgaaacagccactaagcagaactacaag
attctgcacaagtacgtggctttgtatgcgacgcacctgatccgagagggtggctacgcc
caggcgctggccctgtatgtgcaacacggagcccctgccaacccacagaacttcaacatc
tacaaaaggatcttcactgacatggtgagctcccctgggaccaacagtgctgaggcctat
cacagctgggctgaccttcgggatgtgctcttcaacctgtgtgaaaacctggcgaagtcc
agcgaggcgaactctccagcgcacgaggagttcgagaccatgctgctgatcgcccattat
tacgccactcgcgccgcagcccagagcgtcaaacagctggaaactgtggctgccaagctt
tctngttcactgctgcgtcacacccagcttctccctgcagacaaagccttctacgaagca
ggcattgctgccaaggcagtcggctgggagaacatggccttcatcttcctcaaccgcttt
ttggatctgaccgacgccatcgaagaagggaccctggatgccatcgaccactctgacttt
caggatacagacattccctatgaggtgccactcccagccaagcagcacatcccggaggct
cagcgagaagaggttcgagactgggtgctcacagtctcgatggaccagcggctggagcag
gtcctgcctcgagatgagcggggcgtctacgaggcttccctggtggcagccagcaccgga
gttcgggcactgccgtgcctcattacaggataccccattctgaggaacaaaattgaattt
aagcggccagggaaggcagccaacaaagacaactggaataaattccttatggccatcaag
acatcccacagccctgtgtgccaagacgtgttgaagttcatcagtcagtggtgcgggggg
ctgcccagcaccagcttctccttccagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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