KEGG   Sus scrofa (pig): 100625970
Entry
100625970         CDS       T01009                                 
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X2
  KO
K25828  calcium-binding and coiled-coil domain-containing protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100625970 (CALCOCO1)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    Others
     100625970 (CALCOCO1)
SSDB
Motif
Pfam: CALCOCO1 SKICH Zn-C2H2_12 Crescentin Fez1 Pox_A8 DUF3450 DUF724
Other DBs
NCBI-GeneID: 100625970
NCBI-ProteinID: XP_005652631
Ensembl: ENSSSCG00000028481
UniProt: A0A8D1XRW4 A0A4X1WAF5
Position
5:complement(18910698..18930402)
AA seq 691 aa
MEESSLSRAPSRGGVSFLNVARTYIPNTKVECHYTLPPGTVPSASDWIGIFKVEAACVRD
YHTFVWSSVPEGVTDGSPIHTSVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEETDGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRSR
VQELETALATARQEHAELSEQYKGLARSHGELTEERDILSRQQGDHVARILELEEDIQTI
SEKVLTKEVELDRVRDAVKALTREQEKLLGQLKEVQADKEQSEAELQMAQQENRRLNLEL
QEAKGRQEEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASSQQKAT
LLGEELASTAGARDRTIAELHRSRLEVAGVNGRLAELSLHLKEEKSQWSKERAGLLQSVE
AEKDKILKLSAEILRLEKAVQEEKTQNQAFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWSEDPATEDEEAAAGLSCPVALSDSE
DESPEDMRLPPYGLCERGDPDSSPAGPREASPLVVISQPAPIAPHLSGPAEDSSSDSEAE
DEKSVLMAAVQSGGEEANLLLPELGSAFYDMASGFAVGPLSEAGPGGPATPPWKECPICK
ERFPAESEKDGLEHHMDGHFFFSTQDPFTFE
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggaagaatcatcactaagccgggcaccatcccggggtggagtcagctttctgaacgta
gcccggacctacattcccaacaccaaggtggagtgtcactacacacttcccccaggcacc
gtgcccagtgccagcgactggattggcatcttcaaggtggaggctgcctgcgttcgggat
taccacacgtttgtgtggtcctcggtgcctgaaggtgtaactgatggttcccccatccac
accagtgtccagttccaagccagctacctgcccaaaccgggagcccagctctaccagttc
cggtatgtgaaccgccagggccgggtgtgtgggcagagcccccctttccagttccgcgag
ccccggcccatggatgaactggtgaccctggaggagactgacgggggctctgacatcctg
ctggttgtccccaaagcaactgtgctgcagaaccagctggatgaaagccagcaagagagg
aatgacctgatgcagctgaagctgcagctggaggggcaggtgacggagctgaggagccga
gtacaggagcttgagacggccctggcaaccgccaggcaggagcacgcggagctttcggag
cagtacaaggggcttgcccggtcccatggcgagctcacggaagagagggacatcctgagc
cggcaacagggagaccacgtggcccgcatcctggagctggaagaggacatccagaccatc
agtgagaaagtgctgacgaaggaggtggagctggacagggttagagacgcggtgaaggcc
ctgactcgggaacaagagaagctccttgggcagctgaaggaagtccaggcagacaaggag
caaagcgaggccgagctccagatggcacaacaggagaaccgtcgcttgaatttggagctg
caggaggccaagggccggcaggaggagcagagcgctcaggcccagagactgaaggacaag
gtggcccagatgaaggacactctgggccaggcccagcagcgggtggctgagttggagccc
ctgaaggagcagcttcgaggggcccaggagcttgcagcctcgagccagcagaaagccacc
cttcttggggaggagctggccagcacagcgggagccagggaccgcaccatagccgagctg
caccgcagccgcctggaagtggccggagtcaacggcaggctggccgagctcagtctgcac
ttgaaggaggagaagagccagtggagcaaggagcgagcggggttgctgcagagtgtggag
gcagagaaggacaagatcctgaagctgagtgcggagatactgcgactggaaaaggcagtg
caggaggagaagacccagaaccaagcgttcaagactgaactggcccgggaaaaggactct
agcctggtgcagttgtcagagagtaagcgggagctgacggagctgcggtcggccctgcgc
gtgctccagaaggagaaggagcagcttcaggaggagaagcaggaactgctggagtacatg
agaaagctggaggcccgcctggagaaggtggcagacgagaagtggagtgaggaccctgcc
acagaggacgaggaggccgctgcaggcctgagctgcccggtggctctgtcagactcggag
gacgagtctccagaagacatgaggctcccgccctatggcctgtgtgagcgtggagacccc
gactcctcccctgcggggccacgagaggcttctcccctggttgtcatcagccagccagct
cccattgctccccacctctcagggccagccgaggacagtagctctgactcggaggctgaa
gatgagaaatcagtcttgatggcagctgtgcagagtggcggtgaggaggccaacctgcta
cttccggaactgggcagtgccttctatgacatggccagtggctttgcggtgggtcccttg
tcagaggccggccctgggggccctgccacccccccgtggaaggagtgccccatttgtaag
gagcgcttcccagctgagagcgagaaggatggcctggagcaccacatggacggacacttc
ttcttcagcacccaggaccccttcaccttcgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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