KEGG   Sus scrofa (pig): 100626560
Entry
100626560         CDS       T01009                                 
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X9
  KO
K17597  double-stranded RNA-binding protein Staufen
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssc01009]
    100626560 (STAU1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100626560 (STAU1)
Protein phosphatases and associated proteins [BR:ssc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100626560 (STAU1)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     100626560 (STAU1)
   mRNA cycle factors
    Stress granule specific factors
     100626560 (STAU1)
SSDB
Motif
Pfam: Staufen_C dsrm Dicer_dsRBD DND1_DSRM
Other DBs
NCBI-GeneID: 100626560
NCBI-ProteinID: XP_013838788
Ensembl: ENSSSCG00000027444
UniProt: A0A8D0LS81 A0A4X1UIH8
Position
17:complement(50804959..50903155)
AA seq 496 aa
MKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGK
GKTRQAAKHDAAAKALRILQNEPPPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVN
FEVARESGPPHMKSFVTRVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVERV
KPRIKKKTKSIVRLQSTQEYGQGMNPISRLAQIQQAKKEKEPEYLLLTERGLPRRREFVM
QVKVGNHTAEGSGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTPIKKPGDGR
KVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTR
VAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSRVQG
FQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQNT
EMPRTGNGPMSVCGRC
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaaacttggaaaaaaaccaatgtataagcctgtcgatccttactctcggatgcagtcc
acctataactacaacatgagaggaggtgcttatcccccaaggtacttttacccatttcca
gtaccacctttactttatcaagttgagctttctgtgggaggacagcaatttaatgggaaa
ggaaagacgagacaggctgcgaaacacgatgctgctgcgaaagctttgaggatcctgcag
aatgagcccccacctgagaggctggaggtgaatggaagagaatcagaagaagaaaatctc
aataaatctgaaataagtcaagtgtttgagattgcgcttaaacggaacttgcctgtgaat
tttgaggtcgcccgggagagtggcccaccccacatgaagagctttgtgaccagggtgtca
gttggggagtttgtaggggaaggtgaagggaagagcaagaagatttcaaagaaaaacgct
gctatagctgttcttgaggagctgaagaagttaccacctctgcctacagtggagcgagtg
aagcccagaatcaaaaagaaaacaaagtctatagtcaggttacagagcacccaggagtat
ggccaggggatgaaccccattagcagactggcccagatccagcaggcgaaaaaggagaag
gagccggagtacctgctcctcaccgagcgaggcctcccgcgccgccgggagtttgtgatg
caggtgaaggtgggaaaccacactgcagaaggatccggcaccaataagaaggtggcgaaa
cgcaatgcagccgagaacatgctggagatccttggtttcaaagtcccacaggctcagccc
accaaaccagccctcaaatccgaggagaagacacccataaagaaaccaggggatggaaga
aaagtaaccttttttgaacctggctctggggatgaaaacgggactagcaataaagaggac
gagtttaggatgccttatcttagtcatcagcagctgcctgctggaattcttcccatggtg
cctgaggttgcccaggccgtaggggtcagtcaaggacatcacaccaaagacttcacaagg
gtggctccaaatcctgccaaggccacggtaactgccatgatagcccgtgaattgttgtat
gggggcacctcgcctacagccgagaccattttaaagaataacatctcttcaggccacgta
ccccatggacccctcacgagaccgtccgagcagctggactatctctccagagtccaggga
ttccaggttgaatacaaagacttccccaaaaacaacaagaacgaatttgtatctcttatc
aactgctcctctcagccgcccctgatcagccatggtattggaaaggatgtggagtcctgc
cacgacatggctgcactgaacattttaaagttgctgtctgagttggaccaacaaaataca
gagatgccaagaacaggaaatggaccaatgtctgtgtgtgggaggtgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (26)   
   UniProt (2)   
   RefSeq(pep) (24)   
DNA sequence (63)   
   RefSeq(nuc) (45)   
   GenBank (9)   
   EMBL (9)   
Protein domain (4)   
   Pfam (4)   
All databases (105)   

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