KEGG   Sus scrofa (pig): 100627068
Entry
100627068         CDS       T01009                                 
Symbol
SLC1A2
Name
(RefSeq) excitatory amino acid transporter 2 isoform X2
  KO
K05613  solute carrier family 1 (glial high affinity glutamate transporter), member 2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04721  Synaptic vesicle cycle
ssc04724  Glutamatergic synapse
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100627068 (SLC1A2)
   04721 Synaptic vesicle cycle
    100627068 (SLC1A2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100627068 (SLC1A2)
   05016 Huntington disease
    100627068 (SLC1A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssc02000]
    100627068 (SLC1A2)
Transporters [BR:ssc02000]
 Solute carrier family (SLC)
  SLC1: High-affinity glutamate and neutral amino acid transporter
   100627068 (SLC1A2)
SSDB
Motif
Pfam: SDF BPD_transp_1_N
Other DBs
NCBI-GeneID: 100627068
NCBI-ProteinID: XP_003480756
Ensembl: ENSSSCG00000013296
UniProt: A0A4X1SNF2 A0A8D0K951
Position
2:25603892..25771840
AA seq 574 aa
MASTEGANNMPKQVEVRMHDSHLSSEEPKPRHLGLRLCDKLGKNLLLTLTVFGVILGAVC
GGFLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRA
MVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENL
VQACFQQIQTVTKKVLVAPPSDEDGNATNAVISLLNETVTEGPEETQVVIKKGLEFKDGM
NVLGLIGFFIAFGIAMGKMGEQAKLMVEFFNILNEIVMKLVIMIMWYSPLGIACLICGKI
IAIKDLEVVARQLGMYMITVIVGLIIHGGIFLPLIYFLVTRKNPFSFFAGIFQAWITALG
TASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVL
DGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTS
VNVVGDSFGAGIVYHLSKSELETIDSQHRVHEDIEMTKTQSIYDDMKNHRESNSNQCVYA
AHNSVIVDECKVTLAANGKSADCSVEEEAWKREK
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggcatccacggaaggtgccaacaacatgcccaagcaggtggaagtacggatgcacgac
agccacctcagttcagaggagcccaagccccggcacctggggctgcgcttgtgcgacaaa
ctggggaagaatctcctgctgacgttgaccgtgttcggtgtcatcctgggggcagtatgt
ggaggatttcttcgcttggcatctcctatccaccctgatgtggttatgttaatagccttc
ccaggggatatactcatgaggatgctaaaaatgcttatcctccctttaatcatctccagt
ttaatcacagggttgtcgggcctggatgctaaagccagtggccgcctgggcacgagagct
atggtgtattacatgtccaccaccatcatcgccgcagtgctgggggtcatcctggtcttg
gctatccatccagggaaccccaaactcaagaagcagctggggcctgggaagaagaacgac
gaagtgtccagcctggatgcctttctcgacctcattcgaaatctcttccctgaaaacctc
gtccaagcttgttttcagcagattcaaacagtgacgaagaaagtcctggtggcccctccg
tcagacgaggatggcaatgccaccaacgctgtcatctcgctcctgaacgagactgtgact
gagggtcctgaggaaacgcaggtggttatcaagaagggcctggagttcaaggatggcatg
aatgtcttaggtctgatagggtttttcattgcctttggcatcgccatggggaagatgggt
gagcaggccaagctgatggtggaattcttcaatattttgaatgagattgtgatgaagttg
gtgatcatgatcatgtggtactctcccttgggtatcgcctgcctaatttgtgggaagatc
attgcaatcaaggacttagaagtggttgccaggcaactagggatgtacatgatcacggtg
attgtcggcctcatcatccacgggggaatctttctccccttgatttactttctagtgacc
aggaaaaaccctttctccttttttgctggcattttccaagcttggatcactgccctgggt
accgcttccagtgctggaactttgcctgtcaccttccgttgcctggaagaaaatctaggg
attgataaacgtgtgaccaggtttgtccttccagttggcgccaccattaacatggacggt
acagccctttatgaagcggtggccgccatctttatagcccagatgaatggcgttgtcctc
gatggaggccagattgtgactgtaagcctcacagccacactggccagcgttggtgcagcc
agtatccccagtgccggactggttaccatgctcctcattctgacagcggtgggcctgccg
actgaggacatcagcctgctggtggctgtggattggctgctggacaggatgagaacgtcc
gtcaatgtcgtgggggactcttttggggctgggatagtctatcacctctccaagtctgag
ctggaaaccattgattcccagcaccgagtgcatgaagatatcgaaatgaccaagacccag
tccatttatgatgacatgaagaaccatagagaaagcaactctaaccagtgtgtctatgct
gcacacaactctgtcatagtagatgagtgcaaggtaactctggcagccaatggaaagtca
gccgactgcagcgttgaggaggaagcttggaaacgtgaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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