KEGG   Sus scrofa (pig): 100627390
Entry
100627390         CDS       T01009                                 
Symbol
BBS1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
  KO
K16746  Bardet-Biedl syndrome 1 protein
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100627390 (BBS1)
Cilium and associated proteins [BR:ssc03037]
 Primary cilia and associated proteins
  BBSome
   100627390 (BBS1)
SSDB
Motif
Pfam: BBS1 BBS2_Mid
Other DBs
NCBI-GeneID: 100627390
NCBI-ProteinID: XP_003353805
Ensembl: ENSSSCG00000012946 ENSSSCG00000025339
UniProt: A0A286ZWI7 A0A8D1LGF4
Position
2:complement(5886989..5906468)
AA seq 593 aa
MAAASSSDSDGGRAESSEANSKWLDAHYDPMANIHTFSACLALADLHGDGEYKLVVGDLG
PGGQQPRLKVFKGPTVLSESPLPALPAAAATFLMEQHEPRTPALALASGPCVYVYKNLRP
YFKFSLPDLPPNPLEQDLWNQAKEDRIDPLTLKEMLEGIREKAEVPLSVQSLRFLQLELR
DMEAFVNQHKSKPIRRQTVITTMATLKKNLADEDAVSCLVLGTENKELLVLDPGAFTILA
QMSLPSVPVFLEVSGQFDVEFRLAAACRNGNIYMLRRDSKRPKYCIELSAQPVGLVRVHK
ILVVGSNQDSLHGFTHKGKKLWTVPMPAAILTMNLLEQQSRGLQAVMAGLANGEVRIYHD
KALLNVIRTPDAVTSLCFGRYGREDNTLIMTTRGGGLLIKILKRTAVFVEGGGEAGPPPA
QAMKLNVPRKTRLYVDQTLREREAGTAMHRAFQADLYLLRLRAARAYVQALESSLSPVSA
TAREPLKLHAVVQGLGPTFKLTLHLQNVSAARPIVGLRVCFLYNEVLYALPRAFFKVPML
VPGLSYPLETFVESLSDKGISDIIKVLVLREGQSAPLLSAHINMPVSEGLAAA
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggctgctgcgtcttcctcggattcagacggcggcagagctgagagcagtgaagccaat
tcgaaatggttggacgcacactacgaccccatggccaacatccacaccttttccgcctgc
ctggcgctggcagatttgcatggggacggggagtacaagctggtggtgggagaccttggc
ccaggtgggcagcagccccgcctgaaggtgtttaaaggacccacggtgctgagtgaaagc
ccactgcctgcactaccagccgccgctgccaccttcctcatggagcaacatgagccccgg
acaccagctctggcactcgcgtcgggcccttgcgtgtatgtgtataagaatctcaggccc
tacttcaagttcagcctgcccgacttgcctccaaacccgctggagcaagacctttggaac
caggccaaagaggaccgcattgaccccttgaccctgaaggagatgctggagggcatccgg
gagaaggcagaggtgcctttgtctgtacagtcgctcaggtttctgcagctggagctgagg
gacatggaggcgtttgtgaaccagcacaagtccaagcccatcaggcggcagacggtcatc
accaccatggccaccttaaagaaaaacctggctgatgaggacgctgtgtcctgcctggtg
ctgggcacggagaacaaggagctgctggtgctggacccgggggccttcaccatcttggcc
cagatgagcctacccagcgtccccgtcttcctggaggtttctggccagttcgacgtggag
ttccgtcttgccgccgcctgccgcaacgggaacatctatatgctgaggagagactccaag
cgccccaagtactgcatcgagctgagcgcccagcctgtggggcttgtccgggtacacaag
atcctggtggtgggcagcaaccaagacagcctgcacggcttcacccacaagggtaagaag
ctgtggacagtgccgatgcctgcagccatcctgaccatgaacctcctggagcagcagtcc
cggggcctgcaggccgtcatggccgggctggccaatggggaggtccgcatttaccacgac
aaggccctgctcaacgtcatccgcacgccggatgcggtgaccagcctttgttttggccgc
tatgggagagaagataacaccctcatcatgaccacacgaggtgggggcctgcttatcaag
attctgaagcgcacagcagtgttcgtggaggggggcggtgaggccggccccccaccagcc
caggccatgaaactcaacgtgccccgaaagacccggctttatgtggatcagaccctgcga
gagcgggaagctggcaccgccatgcaccgggccttccaggcagacctctacctgctgcgc
ctccgggccgcccgtgcctacgtgcaggccctcgagtccagcctgagccctgtgtccgca
accgcccgggagccgctcaagctgcacgctgtggttcagggcctgggccccacctttaag
ctgacactgcacctgcagaacgtctctgcagcccggcccatcgtggggctgcgggtctgc
ttcctgtacaacgaggtgctctacgccctgccccgggccttcttcaaggtccccatgctg
gtgccagggctcagctaccccctggagacctttgtggagagtcttagtgacaagggcatc
tcagacattatcaaggtgctggtgcttcgagaaggccagagcgcaccgctgcttagtgcc
cacatcaacatgcccgtgagtgaggggctggcagccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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