KEGG   Sus scrofa (pig): 100627693
Entry
100627693         CDS       T01009                                 
Symbol
RAB7B
Name
(RefSeq) ras-related protein Rab-7b
  KO
K07898  Ras-related protein Rab-7B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04137  Mitophagy - animal
ssc04140  Autophagy - animal
ssc04145  Phagosome
ssc04148  Efferocytosis
ssc05132  Salmonella infection
ssc05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100627693 (RAB7B)
   04140 Autophagy - animal
    100627693 (RAB7B)
   04137 Mitophagy - animal
    100627693 (RAB7B)
   04148 Efferocytosis
    100627693 (RAB7B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100627693 (RAB7B)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100627693 (RAB7B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100627693 (RAB7B)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:ssc04031]
    100627693 (RAB7B)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    100627693 (RAB7B)
GTP-binding proteins [BR:ssc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    100627693 (RAB7B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB ATP_bind_1 cobW VapE-like_dom AAA_22 nSTAND3 AAA_14 PduV-EutP Septin
Other DBs
NCBI-GeneID: 100627693
NCBI-ProteinID: XP_003357460
Ensembl: ENSSSCG00000022307
UniProt: A0A4X1UT08 A0A8D0PWS1
Position
9:complement(66635636..66666034)
AA seq 200 aa
MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ
IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPMEQSYPMV
VLGNKIDLADRQVPQEVAQGWCKEKDIPYFEVSAKNDINVVQAFEMLAGRALSRYRSILE
SYFTDSIKLSPEDQSKSRCC
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaatcctcggaagaaggtggacctcaagctcatcatcattggagccctgggtgtaggc
aagacctccctcctccaccagtatgtacataagacattttatgaagactatcagaccaca
ctgggggccagcatcctctctaagatcatcatattggatgacacgactttgaagctacag
atctgggacacgggcggacaggagcgcttccgctccatggtgtccacattctacaaaggc
tctgatggctgcatcctggcttttgatgtcactgacctggagtcttttgaagccctggaa
acctggcggggtgatgttctggccaaaaccattccgatggagcagtcctaccccatggtg
gtgctggggaacaagatcgatctggcagaccgtcaggtgccgcaggaggtagcccaaggc
tggtgtaaagagaaggacattccctattttgaagtcagtgccaagaatgacatcaatgtg
gtacaggcctttgagatgctggccggtcgggctctgtcgaggtatcgaagcatcttagag
agttacttcacagactccatcaagctctcaccagaagaccagtccaagagcagatgctgt
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (37)   

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