KEGG   Sus scrofa (pig): 100628127
Entry
100628127         CDS       T01009                                 
Symbol
CHMP1A
Name
(RefSeq) charged multivesicular body protein 1a
  KO
K12197  charged multivesicular body protein 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04144  Endocytosis
ssc04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100628127 (CHMP1A)
  09143 Cell growth and death
   04217 Necroptosis
    100628127 (CHMP1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100628127 (CHMP1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100628127 (CHMP1A)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100628127 (CHMP1A)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100628127 (CHMP1A)
  Exosomal proteins of other body fluids (saliva and urine)
   100628127 (CHMP1A)
  Exosomal proteins of colorectal cancer cells
   100628127 (CHMP1A)
SSDB
Motif
Pfam: Snf7 Ist1 DUF6247 DUF5871 DUF2868 NagJ_C
Other DBs
NCBI-GeneID: 100628127
NCBI-ProteinID: NP_001230289
Ensembl: ENSSSCG00000023677
UniProt: A0A4X1TD22 I3LU89
Position
6:351878..358655
AA seq 196 aa
MDDTLFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGV
NWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDKFEQQVQ
NLDVHTAVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSV
RSQEDQLSRRLAALRN
NT seq 591 nt   +upstreamnt  +downstreamnt
atggacgatactctgttccagttgaagttcacagcgaagcagctggagaagctggccaag
aaggcggagaaggactccaaggcggagcaggccaaggtgaagaaggcccttcagcagaag
aacgtggagtgtgcgcgggtgtacgccgagaacgccattcgcaagaagaatgagggtgtg
aactggctgcgcatggcgtcccgcgtggatgcggtggcctccaaggtgcagacggccgtg
accatgaagggggtgacgaagaacatggcacaggtgaccaaagccctggaccgcgcgctc
agcaccatggacctgcagaaggtctctgcggtgatggataagtttgagcagcaggtgcag
aacctggatgtgcacacggcggtgatggaggactccatgagctcggccaccacgctgacc
acgccgcaggagcaggtggacagcctcatcatgcagatcgctgaggagaacggcctggag
gtcctggaccagctcagccagctgcccgagggcgcctccgccgtgggcgagagctccgtg
cgcagccaggaggaccagctgtctcggaggttggctgccctgaggaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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