KEGG   Sus scrofa (pig): 100642182
Entry
100642182         CDS       T01009                                 
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100642182 (PNPT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100642182 (PNPT1)
   03016 Transfer RNA biogenesis [BR:ssc03016]
    100642182 (PNPT1)
Enzymes [BR:ssc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     100642182 (PNPT1)
Messenger RNA biogenesis [BR:ssc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     100642182 (PNPT1)
Transfer RNA biogenesis [BR:ssc03016]
 Prokaryotic type
  tRNA degradation factors
   100642182 (PNPT1)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 PNPase S1 S1_2 RST
Other DBs
NCBI-GeneID: 100642182
NCBI-ProteinID: NP_001233196
Ensembl: ENSSSCG00000022880
UniProt: F8SIP3
Position
3:85595356..85639665
AA seq 784 aa
MAACRGCCSCLRLRPLGRGPFRLPGRDRTLTQLQVRALWSGGRSRTVAVDLGSRKLEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFDDTQILCNLLAVDGVNEPDVLAINGASVALSLS
DIPWNGPIGAVRIGMIDGECVVNPTRKEMSSSTLNLVVTGAPKSQIVMLEASAENILQQD
FCHAIKVGVKYTQQIIQGIQQLVKEIGVSKRTPQKLFVPSPEIVKHAHKLAMEKLYTVFT
DHEHDKISRDEAVNKIRLDTEEQLKEKYPEVDSYEIIESFNVAAKEVFRSIILNEYKRCD
GRDLTSLRNIKCEVDMFKILHGSSLFQRGQTQVLCTVTFDSLESSIKSDRIITAIDGIKD
KNFMLHYEFPPYATNEIGKVTGVNRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAIGLVTKNNPDKGEIEDYRLLTDILGIEDYH
GDMDFKIAGTAKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTIPKPRASR
KENGPVVETVQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPSAMHEA
KDFITEICKDDQEQQLEFGAVYTATITEIRDTGVMVKLYSNMTAVLLHNTQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTIVKTLNDRNSIVMGECISQSSS
NSSQ
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggcggcctgcaggggctgctgctcatgcctccggcttcggccgctgggcagaggtccc
ttccgtctgccagggagggatcggacactcacccagctgcaggtgcgagcactatggagt
ggcgggaggtcccgaaccgtggccgtggacttaggcagcagaaaattagaaatatcatct
ggaaaactggccagatttgcagatggctctgctgtagtacagtcaggtgacactgcagtg
atggttacagcagtcagtaaaacaaaaccttcaccttcccagttcatgcctttggtggtt
gactatagacaaaaggctgctgcagcaggtagaattcccacaaactatcttagaagagag
attggttcttctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacct
ctctttccagctggctactttgatgatacacagatcctttgtaatctgttagcagtagat
ggtgttaatgaacctgatgtcctagcaattaatggtgcttctgtagccctctcattatca
gatataccttggaatggacctattggggcagtacgaataggaatgattgatggagaatgt
gttgttaacccaacacgaaaagaaatgtcttccagtactttaaatttagtggttactgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaatattttacaacaggac
ttctgccatgctatcaaagtgggagtgaaatatacacaacaaataattcagggcatccag
cagttggtaaaagaaattggtgttagcaagaggacacctcagaagttatttgttccttca
ccagagattgtgaaacatgctcataaactcgccatggaaaaactctacacagtttttaca
gatcatgaacatgataaaatttccagggatgaagctgttaacaagattagattagataca
gaggaacaactaaaagaaaaatatccagaggttgattcatatgaaataatagaatccttc
aatgttgctgcaaaggaggtttttagaagtattattttgaatgaatacaaaaggtgtgat
ggtcgtgatttgacttcacttaggaatataaaatgtgaggtagatatgtttaaaattctt
catggatcatcattatttcaaagaggacaaacacaggtgctttgtactgttacatttgat
tcattagaatccagtattaagtcagaccggattataacagctatagatgggataaaggat
aaaaacttcatgctgcactatgagtttcctccttatgcaactaatgaaatcggcaaagtc
acaggtgtaaatagaagagaacttgggcacggggctcttgctgagaaagctttgtatcct
gttatccctaaagattttcctttcaccataagagtcacatctgaagtactagagtcaaat
gggtcatcttctatggcatctgcatgtggtggaagtttagcattaatggatgcaggagtt
ccaatttcatctgctgttgcaggtgtggcaataggattggtcaccaaaaacaatcctgac
aagggtgaaatagaagattatcgtttgttgacagatattctggggattgaagattaccat
ggtgacatggatttcaaaatagccggcactgctaagggaataactgcattacaggctgat
attaaactacctggaataccaataaaaattgtaatggaggccattcagcaagcctcagtg
gcaaagaaggagatattacagattatgaacaaaacaattccaaaacctcgagcatctaga
aaagaaaatggacctgttgtagaaactgttcaggttccattatcaaaacgagcaaaattt
gttggaccaggtggctatcatttaaaaaaacttcaggctgaaacaggagtaactattagt
caggtggatgaagaaacattttccatatttgcaccaacacccagtgctatgcatgaagca
aaagacttcattactgaaatctgcaaagatgatcaggagcagcaattagaatttggagca
gtgtacaccgctacaataactgaaatcagagacactggagtaatggttaaactttattca
aatatgactgcagtactacttcataacacacaacttgatcaacgaaagattaaacatccc
actgctttaggattagaagttggccaagaaattcaggtgaaatattttggacgtgatcca
gctgatggaaggatgcggctttctcgtaaagtgctccagtctccagccacaactattgtc
aaaactttaaatgacagaaacagtattgtaatgggagaatgtatttcacagtcatcatct
aattcttctcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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