KEGG   Sus scrofa (pig): 100736934
Entry
100736934         CDS       T01009                                 
Symbol
HAP1
Name
(RefSeq) huntingtin-associated protein 1 isoform X1
  KO
K04647  huntingtin-associated protein 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04727  GABAergic synapse
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100736934 (HAP1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100736934 (HAP1)
   05016 Huntington disease
    100736934 (HAP1)
   05022 Pathways of neurodegeneration - multiple diseases
    100736934 (HAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100736934 (HAP1)
Membrane trafficking [BR:ssc04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    100736934 (HAP1)
SSDB
Motif
Pfam: HAP1_N DUF4250 Sigma70_ner NOA36
Other DBs
NCBI-GeneID: 100736934
NCBI-ProteinID: XP_013836418
Ensembl: ENSSSCG00000017427
UniProt: F1S0M4 A0A8D0Z706
Position
12:20938463..20950053
AA seq 637 aa
MRPKELGQGCAGHGPGPGDPGAVTPAPPSAANPAPQPSTEPEPVPAQAPEAGQGAGYGSS
CVSGPPEGARRASESGSKAGAQRTSAFSVDQGNAQSVLDNSDVPWTRFIFRGPFGSQASG
LGTGKAAGIWKTPAACISRRPEVSGPERTAFIRELEEALCPDQPLPVKKITQEDVKVMMN
LLEERERDLNTAARIGRSLVKQNSVLTEENSKLEAMLGSAREEILHLRHQVSLRDDLLQL
YSDSDEEEEEEEEGEEEEEEEEEEEEEEDGEEEEEQRTPLAESELHCCPQLEALQEQLRL
LEEENEQLREEASQLDDLEEEEQMLILDCVEQFSEASQQMAELSEVLALRMENFEQQQRE
VAQLRAQVVKLQQCCRSYGVETEKLQQQLASEKEIQMQLQDELQDLREKYSECGGMLIEA
QDEVRTLRQQAPVSTGSVTHYTYTVPLEALPDFQETLAEELRMSIRRIISDRVFFMERNY
EVTPEETSDLGYELRYSEEREQKQGLEAEEGLMPAEEFVPAEELVPEEEELGVTEEAVPA
EEGVSEEAELVSEEAEAWEEVELELDEATRTSKVTSALGAGGLGPSHLDMKYVLQQLANW
QDAHYRQQLRQKMLQKGECSHGGLPPASWTNCRSSSR
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgcgcccgaaagagttggggcagggatgcgccgggcacgggccgggacccggggatccc
ggagcagtcacccctgctcctccgtccgcagccaatcccgctccacagccttccaccgag
cctgaacccgtccctgcgcaggcacccgaggctggacagggagcaggatacggatccagt
tgcgtctcaggacccccggaaggcgctcgccgggcctccgagtctggatccaaggcagga
gcccagcgcacgtctgcattctccgtcgaccaggggaatgcacagtccgtgctcgacaac
tcggacgtgccgtggactcgctttatattccgaggaccttttggttcccaagccagtggc
ttggggactggaaaggcggcgggcatctggaagacgccagctgcctgcatcagccggcgg
cctgaggtgtctggccccgagcgcaccgcctttattcgagagttagaggaagcactgtgt
cccgaccagcccctgccagtcaagaagatcacccaagaagatgtcaaagtgatgatgaat
ttgctagaggagagagaacgggacctgaacactgcagctcgcattggccggtccctggtg
aaacagaacagtgttctgacggaggagaacagcaagctggaagccatgctgggctcggcc
agggaggagattttacatctcaggcaccaggtgagcctgcgggatgaccttctccagctt
tactcggattctgatgaggaggaggaggaggaggaggaaggtgaagaggaggaggaagaa
gaagaggaagaagaggaggaggaagatggggaggaagaagaagagcagaggacccctctg
gcagagtcagagttgcactgctgcccgcagctggaagccctgcaggagcagctgaggctg
ctggaggaggagaacgagcagctgcgagaggaggcctcccagctcgacgaccttgaggag
gaggagcagatgctcattctggactgcgtggagcagttttcggaggccagccagcagatg
gccgagctgtcggaggtgctggcgctccggatggagaactttgagcagcagcagagggag
gtcgcccagctgcgggcccaggtggtgaagctgcagcagtgctgccggtcgtatggggtg
gagactgagaagttgcagcagcagctggcttccgagaaagaaatccagatgcagctccag
gacgagctgcaggaccttcgggagaagtactcagagtgtgggggcatgctgattgaggcc
caggacgaggtgaggacactccgccagcaagcccccgtgtccactggctctgtcacccac
tacacgtacactgtacctctggaggcgcttcctgactttcaggagaccctggctgaggag
ctcagaatgtctataaggaggattatctcagaccgggtgttttttatggaaaggaattat
gaagtgactccagaggagacatcagacctggggtatgagctgcgctacagtgaggagcga
gagcagaagcagggcctcgaggccgaggaggggctgatgccggccgaggagttcgtgcct
gcggaggagttggtgcccgaggaggaggagctgggggtcaccgaagaggcggtgccggct
gaggagggggtgtcggaagaggccgagctggtgtccgaggaggccgaggcctgggaggag
gtggaactggagttggatgaggcaacgcggacgagcaaggtgacctcagccctgggggcc
ggcggcttggggccctcacacctggacatgaagtatgtcctccagcagctggccaactgg
caggatgcccattacaggcagcagctgaggcagaagatgctccagaaaggtgagtgctcc
catgggggcctccctccagccagttggacaaactgcagatcgtcaagcagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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