KEGG   Sus scrofa (pig): 106504120
Entry
106504120         CDS       T01009                                 
Symbol
SORT1
Name
(RefSeq) sortilin isoform X3
  KO
K12388  sortilin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04142  Lysosome
ssc04722  Neurotrophin signaling pathway
ssc04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    106504120 (SORT1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    106504120 (SORT1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    106504120 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 106504120
NCBI-ProteinID: XP_013852742
Ensembl: ENSSSCG00000006831
UniProt: A0A480IRZ7 A0A8D1IYE9
Position
4:110721110..110791406
AA seq 833 aa
MERPRGAAQGLSRWPHGLGLLLLLLLQLLPPASLGQDRLDAPPPPAAPLSRWSGPVGVSW
GLRAAAPGGPVPRGGRWRRSALDEDEDCGGVRDFVARLANNTHQHVFDDLSGSVSLSWVG
DSTGIILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPEN
SGKVILTAEVSGGSHGGRIFRSSDFAKNFIQTNLPFHPLTQMMYSPQNSDHLLALSTENG
LWVSKNFGGKWEEIHKAVCLAKWGSDSTIFFTTYVNGSCKADLGALELRRTSDLGKSFKT
IGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAAND
DMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYMTSV
LSEDNSIQTMITFDQGGRWKHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAP
LSEPNAVGIVIAHGSVGDAISVMIPDVYISDDGGYSWLKMLEGPHYYTILDSGGIIVAIE
HSSHPINVIKFSTDEGQCWQTYVFSREPIYFTGLASEPGARSMNISIWGFTESFLTRQWV
SYTIDFKDILERNCEEKDYTVWLAHSTDPGDYGDGCILGYKEQYLRLRKSSVCQNGRDYV
VTKQPSVCPCSLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKI
PGDRCQGGVNPAREVKDLKKKCTSNFLSPEKQNSKSSSVPIILATVGLMLVTVVAGVLIV
KKYVCGGRFLVHRYSVLQQHAEANGVDGVDALDTASHTTKSGYHDDSDEDLLE
NT seq 2502 nt   +upstreamnt  +downstreamnt
atggagcggccccggggagctgcgcagggcctctcgcgctggccccacggcctcggcctc
cttctcctcctcctcctccagctgctgccgccggcaagcctcggccaggaccggctggac
gcgccgccgccgcccgctgcgccgctgtcgcgctggtccggccccgtcggggtgagctgg
gggctgcgcgcggccgcgcctgggggcccggttccccgcggcggccgttggcgccgcagc
gcgctcgatgaggacgaggactgcggcggggtccgggacttcgtcgccaggctggccaac
aacacacaccagcatgtgtttgatgatctcagtggctcggtgtccttgtcctgggttggg
gatagcactgggatcatcctagtcctgactaccttccatgtaccactggtaattatgact
tttggacagtccaagctgtatcgaagtgaggactatggaaagaactttaaggatattaca
aatctcatcaataacaccttcattcgaactgaatttggcatggctattggtcctgagaac
tctgggaaggtgattttaacagcagaggtgtcggggggaagtcatggaggaagaatcttc
agatcatcagattttgcaaagaacttcattcagaccaacctcccttttcaccctctgact
cagatgatgtatagccctcagaattctgatcatctgttagccctcagcaccgaaaatggc
ctgtgggtgtccaagaattttgggggaaaatgggaagaaatccacaaagcagtatgtttg
gccaaatggggatcagacagcaccatcttcttcaccacctatgtgaacggctcctgcaaa
gctgaccttggggccctggaattacggagaacttcagacttggggaaaagcttcaaaacc
attggtgtgaaaatctactcatttggtcttgggggacgtttcctttttgcctctgtgatg
gctgataaggatacaaccagaaggattcatgtatcaacagatcaaggggacacatggagc
atggcccagctcccctctgtggggcaggagcagttctactctattctagcagctaacgat
gacatggtgttcatgcacgtagacgagcctggagataccggatttggcaccatatttacc
tcggatgatcgaggcatcgtctattccaagtccttggaccggcacctctacaccaccaca
ggtggcgagacagactttaccaacgtgacctccctccgcggcgtctacatgacaagtgtg
ctatccgaagataattctatccagactatgatcacttttgaccaaggaggaaggtggaaa
cacctgaggaagcctgaaaacagtgaatgtgacgctaccgcaaaaaataagaacgagtgc
agccttcatattcacgcttcctacagcatctcccagaaactaaatgtcccaatggcccca
ctctcagagcccaatgctgtcggcatagtcatcgcccacggtagcgtgggagatgccatc
tcagtgatgatcccagatgtgtacatctcagatgacgggggttactcctggctgaagatg
ctggaaggaccccactattacaccatcctggattccgggggcatcattgtagccatcgag
cacagcagccatcctatcaatgtgattaagttctccacagacgaaggtcagtgctggcaa
acctacgtgtttagcagggagcctatctacttcactggcctggcctccgaacccggagct
cggtccatgaacatcagcatctggggtttcacagagtctttcctgactcgccagtgggtc
tcctacaccatcgactttaaagatatccttgaaaggaactgtgaagagaaggactacacc
gtatggctggctcactccacggaccctggggattatggagatggctgcattttaggctat
aaggaacagtacctccggctgcgcaagtcgtccgtctgtcagaatggtcgggactatgtt
gtgaccaagcagccgtccgtctgtccctgttccctggaggacttcctctgtgattttggc
tacttccgtccagaaaacgactccaagtgtgtcgaacagccagaactgaagggccatgac
ctagagttttgtctgtatgggagagaagagcacctgacgacaaatgggtaccggaaaatt
ccaggagacagatgccagggtggagtgaatccagctcgagaagtaaaagacttaaaaaag
aaatgcacgagcaactttttgagtccagaaaaacagaattccaagtcaagttctgttccc
attatcctggccactgtgggactgatgctggtcacagtcgtagccggagtgctcattgtg
aagaaatacgtctgtgggggaaggttcctggtgcaccgatactctgtgctccagcagcac
gcggaggccaatggggtggatggcgtggacgccctggacacagcctcccacaccactaaa
agcggttatcacgatgactcagatgaggacctcctggaatag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (20)   
   RefSeq(nuc) (4)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system