KEGG   Sus scrofa (pig): 106509697
Entry
106509697         CDS       T01009                                 
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
Organism
ssc  Sus scrofa (pig)
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 106509697
NCBI-ProteinID: NP_001302624
UniProt: Q8SNL5
Position
3:complement(32171706..32230775)
AA seq 565 aa
MELGPLEGGYLELLNSSADPLQLYHLYDRMDLAGEEEIELCSEPDTDTINCEQFSRLLCD
MEADEETRETYASIAELDQYVFQDSQLEGLGKDIFIEHIGLEEMISESVEVLEDSGRKSQ
KRSFPEELPADLKHRKLAEPLAMPMVTGTFLVGPVSDSSARPCPSPPALFNKESTPSQAQ
LEDAVPMPAPPSGSLLSCLSVPAGPIQIIPTLSTLPQGLWHISGAGTGVSSILIYQGEMT
QASQAPPVHSLPKSPDRPGSTSPFAPSAVDLPSMPEPALTSRANMTEGSVSPTQCSGDQE
ASSRLPKWPARSPCLGLRPFLHRAALSDTVGLWESLQQRGETKLLQALEEKFTIEPFKAK
SMKDVEDLGNLVQIQRTRSSSEDMAGELPAVRDLKKLEFALGPVLGPQAFPKLVRILEAF
SSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNISDVGACQLAKALPSLA
ASLLRLSLYNNCICDVGAESLAHVLPDMGSLRVLDVQYNKFTAAGVQRLAASLRKCPHME
TLAMWTPTIPFGVQEHLQQQDSRIS
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggagttggggcctctggagggtgggtacttggagcttctcaacagcagtgccgaccct
ctgcagctctaccacctctatgaccggatggacctggctggagaagaagagatcgagctc
tgctcagaacctgacacggacaccatcaactgcgaacagttcagcaggctgttgtgcgac
atggaagcagatgaagaaaccagggaaacttacgccagtatcgcggaactggaccagtat
gtgtttcaagactctcagctggagggcctgggcaaagacattttcattgagcacatagga
ttggaagaaatgatcagtgagagcgtggaggtgctggaggactcagggcggaaaagtcag
aaaagatctttcccggaggagctgcctgcggatctgaagcacaggaagctagccgagccc
ctcgccatgcccatggtgactggcactttcctggtggggccagtgagcgactcctcagct
cgaccctgcccatcacctcctgctctgttcaacaaggaatcaacacccagccaggcccag
ctggaggacgctgtcccaatgccggcgcccccttcaggttccttgttgagctgcctgagt
gtccctgctggacctatccagatcatccccacgctctccaccctgccccaggggctctgg
cacatctcaggggccgggacaggggtctccagtatactcatctaccaaggtgagatgacc
caggccagccaagcaccccctgtccatagcctcccaaagtccccagaccggcctggctcc
accagtcccttcgccccgtcagcagttgacctccccagcatgcctgaaccagccctgacc
tcccgggcaaacatgacagagggcagtgtgtcccccacccaatgctcaggtgatcaagag
gcctccagcaggcttcccaagtggccagcccggtcaccatgcctgggtctgaggcccttc
ctccacagggccgccttgagtgacacagtggggctgtgggagtctctacagcaacgtggg
gagaccaagctactccaggcactggaggagaaatttaccattgagcctttcaaggccaag
tccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacgagaagctct
tctgaagacatggctggggaactccctgctgtccgggacctaaagaagttggaatttgcg
ctgggccctgtcttgggcccccaggctttccccaaactggtgaggatccttgaggccttt
tcttccctgcagcatctggacctggactcgctgagtgagaacaagatcggggacgagggt
gtcgcccagctctcagccaccttccctcaactgaaggccctggagacgctcaacttgtcc
cagaacaacatctccgacgtgggtgcttgccagctggccaaggccctgccctcgctggcc
gcgtccctcctcaggctgagcttgtacaataactgcatctgcgatgtgggagccgagagc
ctggcgcatgtgcttccagacatggggtccctccgggtgctagatgtccagtacaacaag
ttcacagccgccggggtccagcggctcgccgccagcctgagaaagtgccctcacatggag
acgctggcgatgtggacacccaccatcccgtttggtgtccaggaacacctgcagcagcag
gactcaaggatatcctga

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