KEGG   Sus scrofa (pig): 396592
Entry
396592            CDS       T01009                                 
Symbol
TSPO
Name
(RefSeq) translocator protein
  KO
K05770  translocator protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04979  Cholesterol metabolism
ssc05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    396592 (TSPO)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    396592 (TSPO)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    396592 (TSPO)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssc02000]
    396592 (TSPO)
Transporters [BR:ssc02000]
 Other transporters
  Others
   396592 (TSPO)
SSDB
Motif
Pfam: TspO_MBR DUF1358
Other DBs
NCBI-GeneID: 396592
NCBI-ProteinID: NP_998918
Ensembl: ENSSSCG00000000033
UniProt: Q6UN27
Position
5:complement(5723190..5735097)
AA seq 169 aa
MAPPWLPAVGFTLVPSLGGFLSSRNVLGKGLHWYAGLQKPSWHPPHWTLAPIWGTLYSAM
GYGSYMIWKELGGFSEEAVVPLGLYAGQLALNWAWPPLFFGARQMGWALVDLVLTGGVAA
ATAVAWYQVSPLAARLLYPYLAWLAFAATLNYCVWRDNQGRRGGRRPSE
NT seq 510 nt   +upstreamnt  +downstreamnt
atggccccaccctggttgcccgctgtgggcttcacgctggtgcccagcctggggggcttc
ctgagctcacgcaatgtcctcggaaagggcctccactggtacgccggcttgcagaagccc
tcgtggcacccgccacactggacactggcccccatctggggtacactctactcggccatg
gggtatggctcctacatgatctggaaagagctggggggcttctcggaggaggctgtggtt
cccctgggcctctacgctgggcagctggctctgaactgggcatggcctcccctcttcttt
ggcgcccgacaaatgggttgggccctggtggacctcgtgctgacgggtggagtggcagca
gccacggcggtggcctggtatcaggtgagccctctggccgcccgcctgctgtacccctac
ctggcctggctggccttcgcggccacgctcaactactgcgtgtggcgggacaaccagggc
cgccgtggtggccgccggccctcggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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