KEGG   Sus scrofa (pig): 396653
Entry
396653            CDS       T01009                                 
Symbol
ARNT
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator
  KO
K09097  aryl hydrocarbon receptor nuclear translocator
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04066  HIF-1 signaling pathway
ssc04148  Efferocytosis
ssc04934  Cushing syndrome
ssc05200  Pathways in cancer
ssc05207  Chemical carcinogenesis - receptor activation
ssc05208  Chemical carcinogenesis - reactive oxygen species
ssc05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    396653 (ARNT)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    396653 (ARNT)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    396653 (ARNT)
   05207 Chemical carcinogenesis - receptor activation
    396653 (ARNT)
   05208 Chemical carcinogenesis - reactive oxygen species
    396653 (ARNT)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    396653 (ARNT)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    396653 (ARNT)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    396653 (ARNT)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    396653 (ARNT)
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS HLH PAS_9 Per3-like_PAS-A
Other DBs
NCBI-GeneID: 396653
NCBI-ProteinID: NP_001302616
Ensembl: ENSSSCG00000006646
Vega: OTTSUSG00000000947
UniProt: A0A8D0SIB3 A0A4X1SE48
Position
4:98333431..98390012
AA seq 790 aa
MAATTANPEMTADVPSLGPAITSGNPGPGIQGGGAIVQRAIKRRPGLDFDDDGEGNSKFL
RCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGSSSVDPVSMNRLSFVRNRCRNGLGSVKDGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNVCQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTIQ
RPQLGPTANLSLEMGSGQLAPRQQQQQTELDVVPGRDGLASYNHSQVSVQPVTTTGPEHS
KPLEKSEGLFAQDRDPRFSEIYSNINTDQSKGISSSTVPATQQLFSQGNTFPPTPRPAEN
FRNSGLAPPVTIVQPSASAGQMLAQISRHSNPTQGAAPAWTPSTRPGFSAQQVATQATAK
TRSSQFGVGNFQTPSSFSPMSLPGASTASPGAAAYPSLTNRGSSFAPETGQNAGQFQTRT
AEGVGVWPQWQGQQPHHRSSSNEQHVQQSSAQQPGQPEVFQEMLSMLGDQSNSYNNEEFP
DLTMFPSFSE
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcggcgactactgctaaccccgaaatgacagcagatgtaccatcactgggtccagcc
attacctctggaaaccctgggcctgggattcaaggtggaggagccattgttcagagggct
attaagcggcgaccaggattggattttgatgatgatggagaagggaacagtaaatttttg
aggtgtgatgatgatcagatgtctaatgataaggagcggtttgccaggtcggatgatgag
cagagctctgcggataaagagagactcgccagggaaaatcatagtgaaattgaacggcgg
cgacggaacaagatgacagcctacataacagaactgtcagacatggtacccacctgtagt
gccctggctcgaaaaccagacaagctaaccatcttacgcatggcagtttctcacatgaag
tccttacgaggaactggcaacacatccactgatggcacctacaagccgtctttcctcact
gatcaggaactgaaacatttgatcttggaggcagcagatggctttctgtttattgtctca
tgtgaaacaggccgggtggtgtatgtctccgactcagtgacccctgttttgaaccagcca
cagtctgaatggtttggtagcacgctttacgatcaggtgcacccagatgatgtggacaaa
cttcgtgagcagctttccacttcggaaaacgccctgacagggcgtatccttgatctgaag
actggaacagtgaaaaaggaaggtcagcagtcttccatgaggatgtgtatgggctcaagg
agatcgtttatttgccgtatgaggtgtggcagtagttctgtggacccagtatccatgaat
agactgagctttgtgaggaacagatgcaggaatggacttggctctgtgaaggatggggaa
cctcacttcgtggtggtccactgtacaggctacatcaaggcatggcctccagcaggtgtc
tccctcccagatgatgacccagaggctggccaggggagcaagttttgtttagtggccatt
ggcagactacaggtaactagttctcctaactgtacagacatgagtaatgtttgtcagcca
acagagttcatctctcgacataacattgagggaatcttcactttcgtggatcatcgctgt
gtagctactgtgggctaccaaccacaggaactcttaggaaagaatattgtagaattctgt
catcctgaagaccagcagcttctgagagacagcttccaacaggtggtgaaattaaaaggc
caggtgctatctgttatgttccggttccggtctaagaaccgagaatggctgtggatgaga
accagctcctttactttccagaacccttactcagatgaaattgagtacatcatctgtacc
aacaccaatgtgaagaactccagccaggagccacggcctacactgtccaacacaattcag
aggccacagctaggtcccacagctaatttatccctggagatgggctcagggcagctggca
cccaggcagcagcaacagcaaacggaattggatgtggtgccaggaagagatggactagct
agctacaatcattcccaggtttctgttcagcctgtgacaaccacagggccagaacacagc
aagccccttgagaagtcagagggtctatttgcccaggatagagatccaagattttcagaa
atctactccaatatcaatacagatcagagtaaaggcatctcctccagcactgtccctgcc
acccaacagctattctcccagggcaacacattccctcctaccccccggccggcagagaat
ttcagaaatagtggtctggcccctcctgtaaccattgtccagccttcagcttctgcaggg
cagatgttggcccagatttcccgccactccaatcctacccagggagcagccccagcgtgg
acccctagcacccgcccaggcttctctgcccagcaggtggctacccaggctacagccaag
actcgttcttcccaatttggtgtaggcaacttccagactccatcatcttttagccccatg
tccctccctggtgcttctactgcatcacctggtgctgctgcctaccctagtctcaccaat
cgtggatccagctttgctcctgagactggtcagaatgcaggacaattccagacacggaca
gcagagggtgtgggtgtctggccacagtggcagggccagcagcctcatcatcgttcgagt
tctaatgagcaacatgttcaacagtcatcagcacagcaacccggccagcctgaggtcttc
caggagatgctgtccatgttgggagaccagagcaacagttacaacaatgaagaatttcct
gatctaactatgtttccctctttttcagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (10)   
   UniProt (2)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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