KEGG   Sus scrofa (pig): 396656
Entry
396656            CDS       T01009                                 
Symbol
IRF3
Name
(RefSeq) interferon regulatory factor 3
  KO
K05411  interferon regulatory factor 3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04620  Toll-like receptor signaling pathway
ssc04621  NOD-like receptor signaling pathway
ssc04622  RIG-I-like receptor signaling pathway
ssc04623  Cytosolic DNA-sensing pathway
ssc04936  Alcoholic liver disease
ssc05133  Pertussis
ssc05135  Yersinia infection
ssc05160  Hepatitis C
ssc05161  Hepatitis B
ssc05162  Measles
ssc05163  Human cytomegalovirus infection
ssc05164  Influenza A
ssc05165  Human papillomavirus infection
ssc05167  Kaposi sarcoma-associated herpesvirus infection
ssc05168  Herpes simplex virus 1 infection
ssc05169  Epstein-Barr virus infection
ssc05170  Human immunodeficiency virus 1 infection
ssc05171  Coronavirus disease - COVID-19
ssc05203  Viral carcinogenesis
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    396656 (IRF3)
   04621 NOD-like receptor signaling pathway
    396656 (IRF3)
   04622 RIG-I-like receptor signaling pathway
    396656 (IRF3)
   04623 Cytosolic DNA-sensing pathway
    396656 (IRF3)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    396656 (IRF3)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    396656 (IRF3)
   05161 Hepatitis B
    396656 (IRF3)
   05160 Hepatitis C
    396656 (IRF3)
   05171 Coronavirus disease - COVID-19
    396656 (IRF3)
   05164 Influenza A
    396656 (IRF3)
   05162 Measles
    396656 (IRF3)
   05168 Herpes simplex virus 1 infection
    396656 (IRF3)
   05163 Human cytomegalovirus infection
    396656 (IRF3)
   05167 Kaposi sarcoma-associated herpesvirus infection
    396656 (IRF3)
   05169 Epstein-Barr virus infection
    396656 (IRF3)
   05165 Human papillomavirus infection
    396656 (IRF3)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    396656 (IRF3)
   05133 Pertussis
    396656 (IRF3)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    396656 (IRF3)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    396656 (IRF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    396656 (IRF3)
   04131 Membrane trafficking [BR:ssc04131]
    396656 (IRF3)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    396656 (IRF3)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    396656 (IRF3)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 396656
NCBI-ProteinID: NP_998935
Ensembl: ENSSSCG00000003178
Vega: OTTSUSG00000000891
UniProt: Q764M6
Position
6:complement(54701733..54706079)
AA seq 419 aa
MGTQKPRILPWLISQLNQGQLEGVAWLDEGHTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
SGAYTPGKDKPDLPTWKRNFRSALNRKEALRLAEDHSKDPHDPHKIYEFVTSGVGDFPEP
DTSLDLSGRYSTSDTHEDSLDKLLSGMDLASDAGPQSLTLALEQPPQLSLSPSVDAPASC
PNLGVRENPLKQLLANDDEWEFQVTVFYRGCQVFQQTVCSPGGLRLVGSEAEDGTLAGQP
VRLPDPAASLTDRGVADYVRRVLSCLGGGLALWRAGQWLWAQRLGHCHVYWAMGEELIPD
SGHKPDGEVPKDREGGVFDLGPFIEDLIAFIEGSRRSPRYTLWFCMGQSWPQDEPWVKRL
VMVKVVPMCLRALVDMARDGGASSLENTVDLHISNSHPLSLTSDQYKACLRDLVEDMDF
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgggaactcagaagcctcggatcctgccctggctgatatctcagctgaaccaggggcaa
ctggagggcgtggcctggctggatgagggccacacgcgcttccgcatcccttggaagcac
ggcttgcggcaggatgcccagcaggaggacttcggcatcttccaggcctgggccgaggcc
agtggtgcctacactcctgggaaggataagcccgacctgcccacctggaagaggaatttc
cggtctgccctgaaccggaaagaagcattgcgtttagcagaggaccacagcaaggacccc
cacgacccacacaagatctatgagtttgtgacctcaggagttggggactttcctgagcca
gacacctctctagacctcagtggcagatacagtacctctgatacccacgaagacagtctg
gataagttactaagtggcatggacttggcctcggatgcagggccccagagcctgaccctg
gccctcgagcagccccctcagctctccctgagccccagtgtagacgcccccgcttcttgc
cccaacctgggagtccgtgaaaacccactgaagcagctgctggcgaatgacgacgagtgg
gagttccaggtgaccgtcttctaccggggctgccaagtcttccagcagactgtctgcagc
cccgggggcctgcggctggtgggatccgaggccgaggacgggacgctggccgggcagcca
gtgagactgccagaccccgcagcctccctgacggacaggggtgtggcggactacgtgcgc
cgggtgctgagctgcctgggcggggggctggctctgtggagggcggggcagtggctctgg
gcccagaggctggggcactgccacgtgtactgggccatgggcgaggagctcatcccggac
agcggtcacaagcctgacggtgaggtccccaaggacagggaaggaggcgtgttcgacctg
gggcccttcatcgaagatctgattgccttcatcgaaggaagcagacgctcaccacgctac
accctctggttctgcatggggcagtcgtggcctcaggacgagccgtgggtcaagaggctg
gtgatggtcaaggttgtccccatgtgtctccgggccctggtagacatggcgcgggacggg
ggcgcctcctccctggagaacacggtggacctgcacatttccaacagccacccgctctcc
ctcacctccgaccagtacaaggcctgcctccgggacctggtggaggacatggatttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (20)   
   KEGG PATHWAY (20)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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