KEGG   Sus scrofa (pig): 396991
Entry
396991            CDS       T01009                                 
Symbol
IFNG
Name
(RefSeq) interferon gamma precursor
  KO
K04687  interferon gamma
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03050  Proteasome
ssc04060  Cytokine-cytokine receptor interaction
ssc04066  HIF-1 signaling pathway
ssc04217  Necroptosis
ssc04350  TGF-beta signaling pathway
ssc04380  Osteoclast differentiation
ssc04612  Antigen processing and presentation
ssc04630  JAK-STAT signaling pathway
ssc04650  Natural killer cell mediated cytotoxicity
ssc04657  IL-17 signaling pathway
ssc04658  Th1 and Th2 cell differentiation
ssc04659  Th17 cell differentiation
ssc04660  T cell receptor signaling pathway
ssc04940  Type I diabetes mellitus
ssc05140  Leishmaniasis
ssc05142  Chagas disease
ssc05143  African trypanosomiasis
ssc05144  Malaria
ssc05145  Toxoplasmosis
ssc05146  Amoebiasis
ssc05152  Tuberculosis
ssc05160  Hepatitis C
ssc05164  Influenza A
ssc05168  Herpes simplex virus 1 infection
ssc05200  Pathways in cancer
ssc05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ssc05321  Inflammatory bowel disease
ssc05322  Systemic lupus erythematosus
ssc05323  Rheumatoid arthritis
ssc05330  Allograft rejection
ssc05332  Graft-versus-host disease
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    396991 (IFNG)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    396991 (IFNG)
   04630 JAK-STAT signaling pathway
    396991 (IFNG)
   04066 HIF-1 signaling pathway
    396991 (IFNG)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    396991 (IFNG)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    396991 (IFNG)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    396991 (IFNG)
   04612 Antigen processing and presentation
    396991 (IFNG)
   04660 T cell receptor signaling pathway
    396991 (IFNG)
   04658 Th1 and Th2 cell differentiation
    396991 (IFNG)
   04659 Th17 cell differentiation
    396991 (IFNG)
   04657 IL-17 signaling pathway
    396991 (IFNG)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    396991 (IFNG)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    396991 (IFNG)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    396991 (IFNG)
  09172 Infectious disease: viral
   05160 Hepatitis C
    396991 (IFNG)
   05164 Influenza A
    396991 (IFNG)
   05168 Herpes simplex virus 1 infection
    396991 (IFNG)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    396991 (IFNG)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    396991 (IFNG)
   05144 Malaria
    396991 (IFNG)
   05145 Toxoplasmosis
    396991 (IFNG)
   05140 Leishmaniasis
    396991 (IFNG)
   05142 Chagas disease
    396991 (IFNG)
   05143 African trypanosomiasis
    396991 (IFNG)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    396991 (IFNG)
   05323 Rheumatoid arthritis
    396991 (IFNG)
   05321 Inflammatory bowel disease
    396991 (IFNG)
   05330 Allograft rejection
    396991 (IFNG)
   05332 Graft-versus-host disease
    396991 (IFNG)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    396991 (IFNG)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    396991 (IFNG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ssc03051]
    396991 (IFNG)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    396991 (IFNG)
   00536 Glycosaminoglycan binding proteins [BR:ssc00536]
    396991 (IFNG)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    396991 (IFNG)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Interferons
   396991 (IFNG)
Glycosaminoglycan binding proteins [BR:ssc00536]
 Heparan sulfate / Heparin
  Cytokines
   396991 (IFNG)
SSDB
Motif
Pfam: IFN-gamma API5 DUF1765 PRANC
Other DBs
NCBI-GeneID: 396991
NCBI-ProteinID: NP_999113
Ensembl: ENSSSCG00000000481
Vega: OTTSUSG00000001456
UniProt: P17803 A9LN08
Position
5:complement(32477906..32482670)
AA seq 166 aa
MSYTTYFLAFQLCVTLCFSGSYCQAPFFKEITILKDYFNASTSDVPNGGPLFLEILKNWK
EESDKKIIQSQIVSFYFKFFEIFKDNQAIQRSMDVIKQDMFQRFLNGSSGKLNDFEKLIK
IPVDNLQIQRKAISELIKVMNDLSPRSNLRKRKRSQTMFQGQRASK
NT seq 501 nt   +upstreamnt  +downstreamnt
atgagttatacaacttatttcttagcttttcagctttgcgtgactttgtgtttttctggc
tcttactgccaggcgcccttttttaaagaaataacgatcctaaaggactattttaatgca
agtacctcagatgtacctaatggtggacctcttttcttagaaattttgaagaattggaaa
gaggagagtgacaaaaaaataattcagagccaaattgtctccttctacttcaaattcttt
gaaatcttcaaagataaccaggccattcaaaggagcatggatgtgatcaagcaagacatg
tttcagaggttcctaaatggtagctctgggaaactgaatgacttcgaaaagctgattaaa
attccggtagataatctgcagatccagcgcaaagccatcagtgaactcatcaaagtgatg
aatgatctgtcaccaagatctaacctaagaaagcggaagagaagtcagactatgttccaa
ggccagagagcatcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (32)   
   KEGG PATHWAY (32)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (4)   
   Pfam (4)   
All databases (79)   

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