KEGG   Sus scrofa (pig): 397002
Entry
397002            CDS       T01009                                 
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta
  KO
K08034  transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04950  Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    397002 (HNF1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    397002 (HNF1B)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    397002 (HNF1B)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N Homeodomain Homeobox_KN APP1_cat
Other DBs
NCBI-GeneID: 397002
NCBI-ProteinID: NP_999121
UniProt: Q03365
Position
12:complement(39143119..39201631)
AA seq 559 aa
MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAADDGAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNLTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEEAFRQKLAMDAYSSNQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNE
VTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLPPVSTLTN
IHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNSSQAQSVPVINSVAGSLAALQPVQFSQQL
HSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSRFPPAMVVTDTS
SISTLTNMSSSKQCPLQAW
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggtgtccaagctcacgtcgctccaacaagaactcctgagcgccctgctgagctccggg
gtcaccaaggaggtgctggtccaggccttggaggagttgctgccatccccgagtttcggg
gtgaagctggagacgctgcccctgtcccctgggagcgggactgagccggacaccaagccg
gtcttccacactctcaccaacggccacgccaagggccgcttgtccggggacgagggctcc
gaggacggggacgactatgacacccctccgatcctcaaggagctgcaagcgctcaacacc
gaggaggcggcggacgacggggcggaggtggaccggatgctcagcgaggacccttggagg
gctgccaaaatgatcaagggctacatgcagcagcacaacatcccccagagggaggtggtc
gacgtcaccggcctcaaccagtcccacctctcccagcatctcaacaagggcacccccatg
aagacccagaagcgcgccgccctgtacacctggtacgtccgaaagcaacgggagatcctc
cgacaattcaaccagacagtccagagttctggaaatttgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcagtcaacagagccaggggcctgggcagtccgat
gacgcctgctctgagcccaccaacaagaagatgcgtcgcaaccggttcaaatgggggccc
gcgtcccagcaaatcttgtaccaggcctacgaccggcaaaagaaccccagcaaggaagag
agggaggccttagtggaggaatgcaacagagcagagtgtttgcagcgaggcgtctccccg
tccaaagcccacggcctgggctccaacctggtcactgaggtccgcgtctacaactggttt
gcgaaccgcaggaaggaggaggaggcgttccggcagaagctggccatggacgcctacagc
tccaaccagacgcacagcctgaacaccctgctctcgcacagctccccccaccaccagccc
agcacctcgcctcccaacaagctgccaggagtgcgctacaaccagcagggaaacaatgag
gtcacttcctcctcaacaatcagtcaccatggcaacagtgccatggtgaccagccagtcc
gttttacagcaagtctctccagccagcctggacccgggccacaatctcctctcacctgat
ggtaaaatgcagatctcagtctcaggaggaggtttgccccccgtcagcaccttgacgaat
atccacagcctgtcccaccacaatcctcagcaatctcaaaacctcatcatgacgcccctc
tctggagtcatggccattgcacaaagcctcaactcctcccaagctcagagtgtccctgtc
atcaacagcgtggccggcagcctggcagccctgcagcccgtgcagttctcccagcagctg
cacagccctcaccagcagcccctcatgcagcagagcccaggcagccacatggcccagcag
cccttcatggctgccgtgactcagctacagaactcacacatgtacacacacaagcaggag
cccccccagtattcccacacctcccggtttccacctgcaatggtggtcacagataccagc
agcatcagtacgctcaccaacatgtcttccagtaaacagtgtcctctccaagcctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system