KEGG   Sus scrofa (pig): 397007
Entry
397007            CDS       T01009                                 
Symbol
TLR9
Name
(RefSeq) toll-like receptor 9 precursor
  KO
K10161  toll-like receptor 9
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04620  Toll-like receptor signaling pathway
ssc05132  Salmonella infection
ssc05142  Chagas disease
ssc05143  African trypanosomiasis
ssc05144  Malaria
ssc05152  Tuberculosis
ssc05162  Measles
ssc05168  Herpes simplex virus 1 infection
ssc05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    397007 (TLR9)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    397007 (TLR9)
  09172 Infectious disease: viral
   05162 Measles
    397007 (TLR9)
   05168 Herpes simplex virus 1 infection
    397007 (TLR9)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    397007 (TLR9)
   05152 Tuberculosis
    397007 (TLR9)
  09174 Infectious disease: parasitic
   05144 Malaria
    397007 (TLR9)
   05142 Chagas disease
    397007 (TLR9)
   05143 African trypanosomiasis
    397007 (TLR9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ssc04054]
    397007 (TLR9)
   04090 CD molecules [BR:ssc04090]
    397007 (TLR9)
Pattern recognition receptors [BR:ssc04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   397007 (TLR9)
CD molecules [BR:ssc04090]
 Proteins
  397007 (TLR9)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_12 FNIP TIR LRR_9 TIR_2 YiaAB
Other DBs
NCBI-GeneID: 397007
NCBI-ProteinID: NP_999123
Ensembl: ENSSSCG00000011436
Vega: OTTSUSG00000001003
UniProt: Q865R8
Position
13:complement(34353444..34370990)
AA seq 1030 aa
MGPRCTLHPLSLLVQVTALAATLAQGRLPAFLPCELQPHGLVNCNWLFLKSVPHFSAAAP
RANVTSLSLLSNRIHHLHDSDFVHLSSLRTLNLKWNCPPAGLSPMHFPCHMTIEPNTFLA
VPTLEELNLSYNSITTVPALPDSLVSLSLSRTNILVLDPTHLTGLHALRYLYMDGNCYYK
NPCQGALEVVPGALLGLGNLTHLSLKYNNLTEVPRSLPPSLETLLLSYNHIVTLTPEDLA
NLTALRVLDVGGNCRRCDHARNPCRECPKDHPKLHSDTFSHLSRLEGLVLKDSSLYNLDA
RWFRGLDRLQVLDLSENFLYDCITKTTAFQGLARLRKLNLSFNYHKKVSFAHLHLAPSFG
HLRSLKELDMHGIFFRSLSETTLQPLVQLPMLQTLRLQMNFINQAQLSIFGAFPGLLYVD
LSDNRISGAARPVAITREVDGRERVWLPSRNLAPRPLDTLRSEDFMPNCKAFSFTLDLSR
NNLVTIQSEMFARLSRLECLRLSHNSISQAVNGSQFVPLTSLRVLDLSHNKLDLYHGRSF
TELPRLEALDLSYNSQPFTMQGVGHNLSFVAQLPALRYLSLAHNDIHSRVSQQLCSASLC
ALDFSGNDLSRMWAEGDLYLRFFQGLRSLVWLDLSQNHLHTLLPRALDNLPKSLKHLHLR
DNNLAFFNWSSLTLLPKLETLDLAGNQLKALSNGSLPSGTQLRRLDLSGNSIGFVNPGFF
ALAKQLEELNLSANALKTVEPSWFGSMVGNLKVLDVSANPLHCACGATFVGFLLEVQAAV
PGLPSRVKCGSPGQLQGHSIFAQDLRLCLDETLSWNCFGISLLAMALGLVVPMLHHLCGW
DLWYCFHLCLAWLPHRGQRRGADALFYDAFVVFDKAQSAVADWVYNELRVQLEERRGRRA
LRLCLEERDWLPGKTLFENLWASVYSSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRK
DVVVLVILRPDAYRSRYVRLRQRLCRQSVLLWPHQPRGQGSFWAQLGTALTRDNRHFYNR
NFCRGPTTAE
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgggcccccgctgcaccctgcaccccctttctctcctggtgcaggtgacagcgctggct
gcgactctggcccagggcaggctgcctgccttcctgccctgtgagctccagccccacggc
ctggtgaactgcaactggctcttcctgaagtccgtgccccacttctcggcggcagcgccc
cgggccaacgtcaccagcctctccttactctccaaccgcatccaccacttgcacgactct
gacttcgtccacctgtccagcctacgaactctcaacctcaagtggaactgcccgccggct
ggcctcagccccatgcacttcccctgccacatgaccatcgagcccaacaccttcctggcc
gtgcccaccctggaggagctgaacctgagctacaacagcatcacgaccgtgcctgccctg
cccgactccctcgtgtccctgtcgctgagccgcaccaacatcctggtgctagaccccacc
cacctcactggcctacatgccctgcgctacctgtacatggatggcaactgctactacaag
aacccctgccagggggcgctggaggtggtgccgggtgccctcctcggcctgggcaacctc
acacatctctcactcaagtacaacaatctcacggaggtgccccgcagcctgccccccagc
ctggagaccctgctgttgtcctacaaccacattgtcaccctgacgcctgaggacctggcc
aatctgactgccctgcgcgtgcttgatgtgggggggaactgccgccgctgtgaccatgcc
cgcaacccctgcagggagtgcccaaaggaccaccccaagctgcactctgacaccttcagc
cacctgagccgcctcgaaggcctggtgttgaaagacagttctctctacaacctggacgcc
aggtggttccgaggcctggacaggctccaagtgctggacctgagtgagaacttcctctac
gactgcatcaccaagaccacggccttccagggcctggcccgactgcgcaagctcaacctg
tccttcaattaccacaagaaggtgtcctttgcccacctgcacctggcaccctcctttggg
cacctccggtccctgaaggagctggacatgcatggcatcttcttccgctcgctcagtgag
accacgctccaacctctggtccaactgcctatgctccagaccctgcgcctgcagatgaac
ttcattaaccaggcccagctcagcatctttggggccttccctggcctgctgtacgtggac
ctatcggacaaccgcatcagcggagctgcaaggccagtggccattactagggaggtggat
ggtagggagagggtctggctgccttccaggaacctcgctccacgtccactggacactctc
cgctcagaggacttcatgccaaactgcaaggccttcagcttcaccttggacctgtctcgg
aacaacctggtgacaatccagtcggagatgtttgctcgcctctcacgcctcgagtgcctg
cgtctgagccacaacagcatctcccaggcggtcaatggctctcagtttgtgccgctgacc
agcctgcgggtgctggacctgtcccacaacaagctggacctgtatcacgggcgctcgttc
acggagctgccgcgcctggaagcactggacctcagctacaacagccagccctttaccatg
cagggtgtgggccacaacctcagcttcgtggcccagctgcccgccctgcgctacctcagc
ctggcgcacaatgacatccatagccgagtgtcccagcagctctgtagcgcctcactgtgc
gccctggactttagcggcaacgatctgagccggatgtgggctgagggagacctctatctc
cgcttcttccaaggcctaagaagcctagtctggctggacctgtcccagaaccacctgcac
accctcctgccacgtgccctggacaacctccccaaaagcctgaagcatctgcatctccgt
gacaataacctggccttcttcaactggagcagcctgaccctcctgcccaagctggaaacc
ctggacttggctggaaaccagctgaaggccctaagcaatggcagcctgccatctggcacc
cagctgcggaggctggacctcagtggcaacagcatcggctttgtgaaccctggcttcttt
gccctggccaagcagttagaagagctcaacctcagcgccaatgccctcaagacagtggag
ccctcctggtttggctcgatggtgggcaacctgaaagtcctagacgtgagcgccaaccct
ctgcactgcgcctgtggggcgaccttcgtgggcttcctgctggaggtacaggctgccgtg
cctgggctgcccagccgcgtcaagtgtggcagtccggggcagctccagggccatagcatc
tttgcgcaagacctgcgcctctgcctggatgagaccctctcgtggaactgttttggcatc
tcgctgctggccatggccctgggcctggttgtgcccatgctgcaccacctctgcggctgg
gacctctggtactgcttccacctgtgcctggcctggctgccccaccgagggcagcggcgg
ggcgcagacgccctgttctatgatgccttcgtggtctttgacaaagctcagagtgctgtg
gccgactgggtgtacaacgagctgcgggtgcagctggaggagcgccgtgggcgccgcgca
ctgcgcctgtgcctggaggagcgagactggttacctggcaagacgctcttcgagaacctg
tgggcctcagtctacagcagccgcaagaccctgtttgtgctggcccacacggaccgtgtc
agcggcctcttgcgtgccagtttcctgctggcccagcagcgcctgctggaggaccgcaag
gacgttgtagtgctggtgatcctgcgccccgatgcctaccgctcccgctacgtgcggctg
cgccagcgcctctgccgccagagtgtcctcctctggccccaccagccccgtgggcagggc
agcttctgggcccagctgggcacagccctgaccagggacaaccgccacttctataaccgg
aacttctgccggggccccacgacagccgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (9)   
   Pfam (9)   
All databases (86)   

Download RDF
DBGET integrated database retrieval system