KEGG   Sus scrofa (pig): 397031
Entry
397031            CDS       T01009                                 
Symbol
CD163
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130 precursor
  KO
K06545  CD163 antigen
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ssc04090]
    397031 (CD163)
CD molecules [BR:ssc04090]
 Proteins
  397031 (CD163)
SSDB
Motif
Pfam: SRCR SRCR_2
Other DBs
NCBI-GeneID: 397031
NCBI-ProteinID: NP_999141
UniProt: Q2VL90
Structure
Position
5:63300200..63334497
AA seq 1110 aa
MVLLEDSGSADFRRCSAHLSSFTFAVVAVLSACLVTSSLGGKDKELRLTGGENKCSGRVE
VKVQEEWGTVCNNGWDMDVVSVVCRQLGCPTAIKATGWANFSAGSGRIWMDHVSCRGNES
ALWDCKHDGWGKHNCTHQQDAGVTCSDGSDLEMRLVNGGNRCLGRIEVKFQERWGTVCDD
NFNINHASVVCKQLECGSAVSFSGSANFGEGSGPIWFDDLVCNGNESALWNCKHEGWGKH
NCDHAEDAGVICLNGADLKLRVVDGLTECSGRLEVKFQGEWGTICDDGWDSDDAAVACKQ
LGCPTAVTAIGRVNASEGTGHIWLDSVSCHGHESALWQCRHHEWGKHYCNHNEDAGVTCS
DGSDLELRLKGGGSHCAGTVEVEIQKLVGKVCDRSWGLKEADVVCRQLGCGSALKTSYQV
YSKTKATNTWLFVSSCNGNETSLWDCKNWQWGGLSCDHYDEAKITCSAHRKPRLVGGDIP
CSGRVEVQHGDTWGTVCDSDFSLEAASVLCRELQCGTVVSLLGGAHFGEGSGQIWAEEFQ
CEGHESHLSLCPVAPRPDGTCSHSRDVGVVCSRYTQIRLVNGKTPCEGRVELNILGSWGS
LCNSHWDMEDAHVLCQQLKCGVALSIPGGAPFGKGSEQVWRHMFHCTGTEKHMGDCSVTA
LGASLCSSGQVASVICSGNQSQTLSPCNSSSSDPSSSIISEESGVACIGSGQLRLVDGGG
RCAGRVEVYPGASWGTICDDSWDLNDAHVVCKQLSCGWAINATGSAHFGEGTGPIWLDEI
NCNGKESHIWQCHSHGWGRHNCRHKEDAGVICSEFMSLRLISENSRETCAGRLEVFYNGA
WGSVGRNSMSPATVGVVCRQLGCADRGDISPASSDKTVSRHMWVDNVQCPKGPDTLWQCP
SSPWKKRLASPSEETWITCANKIRLQEGNTNCSGRVEIWYGGSWGTVCDDSWDLEDAQVV
CRQLGCGSALEAGKEPAFGQGTGPIWLNEVKCKGNEPSLWDCPARSWGHSDCGHKEDAAV
TCSEIAKSRESLHATGRSSFVALAIFGVILLACLIAFLIWTQKRRQRQRLSVFSGGENSV
HQIQYREMNSCLKADETDMLNPSGDHSEVQ
NT seq 3333 nt   +upstreamnt  +downstreamnt
atggtgctacttgaagactctggatctgcagactttagaagatgttctgcccatttaagt
tccttcacttttgctgtagtcgctgttctcagtgcctgcttggtcactagttctcttgga
ggaaaagacaaggagctgaggctaacgggtggtgaaaacaagtgctctggaagagtggag
gtgaaagtgcaggaggagtggggaactgtgtgtaataatggctgggacatggatgtggtc
tctgttgtttgtaggcagctgggatgtccaactgctatcaaagccactggatgggctaat
tttagtgcaggttctggacgcatttggatggatcatgtttcttgtcgagggaatgagtca
gctctctgggactgcaaacatgatggatggggaaagcataactgtactcaccaacaggat
gctggagtaacctgctcagatggatctgatttagagatgaggctggtgaatggaggaaac
cggtgcttaggaagaatagaagtcaaatttcaagagcggtggggaacagtgtgtgatgat
aacttcaacataaatcatgcttctgtggtttgtaaacaacttgaatgtggaagtgctgtc
agtttctctggttcagctaattttggagaaggttctggaccaatctggtttgatgatctt
gtatgcaatggaaatgagtcagctctctggaactgcaaacatgaaggatggggaaagcac
aattgcgatcatgctgaggatgctggagtgatttgcttaaatggagcagacctgaaactg
agagtggtagatggactcactgaatgttcaggaagattggaagtgaaattccaaggagaa
tggggaacaatctgtgatgatggctgggatagtgatgatgccgctgtggcatgtaagcaa
ctgggatgtccaactgctgtcactgccattggtcgagttaacgccagtgagggaactgga
cacatttggcttgacagtgtttcttgccatggacacgagtctgctctctggcagtgtaga
caccatgaatggggaaagcattattgcaatcataatgaagatgctggtgtgacatgttct
gatggatcagatctggaactgagacttaaaggtggaggcagccactgtgctgggacagtg
gaggtggaaattcagaaactggtaggaaaagtgtgtgatagaagctggggactgaaagaa
gctgatgtggtttgcaggcagctgggatgtggatctgcactcaaaacatcatatcaagtt
tattccaaaaccaaggcaacaaacacatggctgtttgtaagcagctgtaatggaaatgaa
acttctctttgggactgcaagaattggcagtggggtggacttagttgtgatcactatgac
gaagccaaaattacctgctcagcccacaggaaacccaggctggttggaggggacattccc
tgctctggtcgtgttgaagtacaacatggagacacgtggggcaccgtctgtgattctgac
ttctctctggaggcggccagcgtgctgtgcagggaactacagtgcggcactgtggtttcc
ctcctggggggagctcactttggagaaggaagtggacagatctgggctgaagaattccag
tgtgaggggcacgagtcccacctttcactctgcccagtagcaccccgccctgacgggaca
tgtagccacagcagggacgtcggcgtagtctgctcaagatacacacaaatccgcttggtg
aatggcaagaccccatgtgaaggaagagtggagctcaacattcttgggtcctgggggtcc
ctctgcaactctcactgggacatggaagatgcccatgttttatgccagcagcttaaatgt
ggagttgccctttctatcccgggaggagcaccttttgggaaaggaagtgagcaggtctgg
aggcacatgtttcactgcactgggactgagaagcacatgggagattgttccgtcactgct
ctgggcgcatcactctgttcttcagggcaagtggcctctgtaatctgctcagggaaccag
agtcagacactatccccgtgcaattcatcatcctcggacccatcaagctctattatttca
gaagaaagtggtgttgcctgcatagggagtggtcaacttcgcctggtcgatggaggtggt
cgttgtgctgggagagtagaggtctatcctggggcatcctggggcaccatctgtgatgac
agctgggacctgaatgatgcccatgtggtgtgcaaacagctgagctgtggatgggccatt
aatgccactggttctgctcattttggggaaggaacagggcccatttggctggatgagata
aactgtaatggaaaagaatctcatatttggcaatgccactcacatggttgggggcggcac
aattgcaggcataaggaggatgcaggagtcatctgctcagagttcatgtctctgagactg
atcagtgaaaacagcagagagacctgtgcagggcgcctggaagttttttacaacggagct
tggggcagcgttggcaggaatagcatgtctccagccacagtgggggtggtatgcaggcag
ctgggctgtgcagacagaggggacatcagccctgcatcttcagacaagacagtgtccagg
cacatgtgggtggacaatgttcagtgtcctaaaggacctgacacactatggcagtgcccc
tcatctccatggaagaagagactggccagcccctcagaggagacatggatcacatgtgcc
aacaaaataagacttcaagaaggaaacactaattgttctggacgtgtggagatctggtac
ggaggttcctggggcactgtgtgtgacgactcctgggaccttgaagatgctcaggtggtg
tgccgacagctgggctgtggctcagctttggaggcaggaaaagagcccgcatttggccag
gggactgggcccatatggctcaatgaagtgaagtgcaaggggaatgaaccctccttgtgg
gattgtcctgccagatcctggggccacagtgactgtggacacaaggaggatgctgctgtg
acgtgctcagaaattgcaaagagccgagaatccctacatgccacaggtcgctcatctttt
gttgcacttgcaatctttggggtcattctgttggcctgtctcatcgcattcctcatttgg
actcagaagcgaagacagaggcagcggctctcagttttctcaggaggagagaattctgtc
catcaaattcaataccgggagatgaattcttgcctgaaagcagatgaaacggatatgcta
aatccctcaggagaccactctgaagtacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (47)   
   RefSeq(nuc) (5)   
   GenBank (21)   
   EMBL (21)   
3D Structure (3)   
   PDB (3)   
Protein domain (2)   
   Pfam (2)   
All databases (90)   

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