KEGG   Sus scrofa (pig): 397036
Entry
397036            CDS       T01009                                 
Symbol
SOD1
Name
(RefSeq) superoxide dismutase [Cu-Zn]
  KO
K04565  superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04146  Peroxisome
ssc04213  Longevity regulating pathway - multiple species
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05208  Chemical carcinogenesis - reactive oxygen species
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    397036 (SOD1)
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    397036 (SOD1)
 09160 Human Diseases
  09161 Cancer: overview
   05208 Chemical carcinogenesis - reactive oxygen species
    397036 (SOD1)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    397036 (SOD1)
   05014 Amyotrophic lateral sclerosis
    397036 (SOD1)
   05016 Huntington disease
    397036 (SOD1)
   05020 Prion disease
    397036 (SOD1)
   05022 Pathways of neurodegeneration - multiple diseases
    397036 (SOD1)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.15  Acting on superoxide as acceptor
   1.15.1  Acting on superoxide as acceptor (only sub-subclass identified to date)
    1.15.1.1  superoxide dismutase
     397036 (SOD1)
SSDB
Motif
Pfam: Sod_Cu
Other DBs
NCBI-GeneID: 397036
NCBI-ProteinID: NP_001177351
Ensembl: ENSSSCG00000021355
UniProt: P04178 D9D839
Position
13:195326573..195335273
AA seq 153 aa
MATKAVCVLKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSA
GPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVH
EKPDDLGRGGNEESTKTGNAGSRLACGVIGITQ
NT seq 462 nt   +upstreamnt  +downstreamnt
atggcgacgaaggccgtgtgtgtgctgaagggcgacggcccggtgcagggcaccatctac
ttcgagctgaagggagagaagacagtgttagtaacgggaaccattaaaggactggctgaa
ggtgatcatggattccatgtccatcagtttggagataatacacaaggctgtaccagtgca
ggtcctcacttcaatcctgaatccaaaaaacatggtgggccaaaggatcaagagaggcac
gttggagacctgggcaatgtgactgctggcaaagatggtgtggccactgtgtacatcgaa
gattctgtgatcgccctctcgggagaccattccatcattggccgcacaatggtggtccat
gaaaaaccagatgacttgggcagaggtggaaatgaagaaagtacaaagacgggaaatgct
ggaagtcgtttggcctgtggtgtaattgggatcacccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (25)   
   RefSeq(nuc) (1)   
   GenBank (12)   
   EMBL (12)   
Protein domain (1)   
   Pfam (1)   
All databases (57)   

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