KEGG   Sus scrofa (pig): 397058
Entry
397058            CDS       T01009                                 
Symbol
PSMA4
Name
(RefSeq) proteasome subunit alpha type-4
  KO
K02728  20S proteasome subunit alpha 3 [EC:3.4.25.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03050  Proteasome
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05017  Spinocerebellar ataxia
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    397058 (PSMA4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    397058 (PSMA4)
   05012 Parkinson disease
    397058 (PSMA4)
   05014 Amyotrophic lateral sclerosis
    397058 (PSMA4)
   05016 Huntington disease
    397058 (PSMA4)
   05017 Spinocerebellar ataxia
    397058 (PSMA4)
   05020 Prion disease
    397058 (PSMA4)
   05022 Pathways of neurodegeneration - multiple diseases
    397058 (PSMA4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    397058 (PSMA4)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ssc03051]
    397058 (PSMA4)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     397058 (PSMA4)
Peptidases and inhibitors [BR:ssc01002]
 Threonine peptidases
  Family T1: proteasome family
   397058 (PSMA4)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    397058 (PSMA4)
SSDB
Motif
Pfam: Proteasome Proteasome_A_N TRP_N
Other DBs
NCBI-GeneID: 397058
NCBI-ProteinID: NP_001231397
Ensembl: ENSSSCG00000001754
UniProt: A0A8D1NLU2 A0A4X1UWZ5
Position
7:complement(47440576..47448599)
AA seq 261 aa
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKH
EEEEAKAEREKKEKEQKEKDK
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtctcgaagatatgattccaggaccactatattttctccagaaggtcgcttgtaccaa
gttgaatatgccatggaagctattggacatgcaggcacctgtttgggaattttagcaaat
gatggtgttttgcttgcagcagagaggcgcaacatccacaagcttcttgatgaagtcttt
ttttctgaaaaaatttataaactgaatgaggatatggcctgcagtgtggcaggtataact
tctgatgctaatgttctgactaatgaactgaggctcatcgctcaaaggtatttattacag
tatcaggagccaattccttgtgagcagttggtcacagcactgtgtgatatcaaacaagct
tatacacagtttggaggaaaacgtccttttggtgtttcgttgctttacattggctgggat
aaacactatggctttcagctctatcagagtgaccctagtggaaactatggtggatggaaa
gccacatgcattggaaataatagcgctgcagctgtgtcaatgctgaaacaagactacaaa
gaaggagaaatgactctgaagtcagcacttgctttagctatcaaagtcctaaataagacc
atggatgttagtaagctttctgctgaaaaagtggaaattgccacactaacgagagagaat
ggaaagacagtcatcagagttctcaaacaaaaggaagtggagcagttgatcaaaaaacat
gaggaggaagaagctaaagctgagcgtgagaagaaagaaaaagaacagaaagaaaaggat
aaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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