KEGG   Sus scrofa (pig): 397071
Entry
397071            CDS       T01009                                 
Symbol
OPTC
Name
(RefSeq) opticin precursor
  KO
K08128  opticin
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssc00535]
    397071 (OPTC)
Proteoglycans [BR:ssc00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class III
    397071 (OPTC)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_9 LRRNT
Other DBs
NCBI-GeneID: 397071
NCBI-ProteinID: NP_999173
Ensembl: ENSSSCG00000015272
Vega: OTTSUSG00000001663
UniProt: Q8MIS4 A0A4X1V4V4
Position
9:64211477..64220982
AA seq 333 aa
MKLLALLSLLALMLQEAGTASLPEKERERGEDRLHRESDSSTALHLGDYTLSPDSHDGVL
DLSNYEELMDYGDQLPKVKGASLASPTRASSTQSMKPPRTPPSSPTVARPTALSPPGSPT
SHAPGLPTCLVCVCLGSSVYCDDTDLENIPPLPQTTTYLYARFNRINHIRAGDFKGLTKL
KRIDLSSNFISSIDDDALLLLPDLQDLILIENQLAALPTLPTAIEVLDVRLNRLRSSGIQ
PGAFRALEKLQFLYLADNLLDSIPGPLPLSLRSLHLQNNMIETLQRDTFCDPEEHKHTRR
QLEDIRLDGNPINLSLFPSAYFCLPRLPIGRFT
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaagctcctggctctcctgagcctgctggccctgatgctgcaggaagcgggcacagca
tccctcccagagaaggagagggagaggggagaagaccgcctgcacagggaaagcgattct
tccacagctctgcatctgggggactataccctgagcccggacagccacgatggggtcctt
gacctgagcaactatgaagagctcatggactacggggaccagctcccgaaggttaaaggg
gccagcctggcttcgccaaccagggcaagttccactcagagcatgaagcctccaaggaca
cccccttcaagccccacagtggccaggcctactgcactgagcccgccgggttccccaacc
agccatgcaccaggcctgccaacctgtctggtgtgcgtgtgccttggttcctccgtgtac
tgtgatgatacagacctggaaaacattcctcctcttccccagacaaccacctacctgtac
gcccgcttcaaccgcatcaaccacatccgagctggagacttcaaagggctgacaaaactg
aagaggattgacctctccagcaacttcatctcctccatcgacgatgatgccctcctcctg
ctgcctgatctgcaggacctgatcctcattgagaaccagctggcggcactgcctacactg
cccactgccattgaggtcctggacgtccgcctgaaccggctccggagctccgggatacag
cctggagccttcagggcattggagaagctgcagttcctctacctggctgacaacctgctg
gactccatccctgggcctctgcccctgagcctgcgctctctgcacctgcagaataacatg
atagagaccctgcagagggacaccttctgtgaccctgaagagcacaaacacacccggagg
cagctggaagacatccgcctggatggcaatcccatcaacctgagcctcttccccagcgcc
tacttctgcctgcctcggctccccataggccgcttcacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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