KEGG   Sus scrofa (pig): 397086
Entry
397086            CDS       T01009                                 
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc01523  Antifolate resistance
ssc04010  MAPK signaling pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04061  Viral protein interaction with cytokine and cytokine receptor
ssc04064  NF-kappa B signaling pathway
ssc04071  Sphingolipid signaling pathway
ssc04150  mTOR signaling pathway
ssc04210  Apoptosis
ssc04217  Necroptosis
ssc04350  TGF-beta signaling pathway
ssc04380  Osteoclast differentiation
ssc04612  Antigen processing and presentation
ssc04620  Toll-like receptor signaling pathway
ssc04621  NOD-like receptor signaling pathway
ssc04622  RIG-I-like receptor signaling pathway
ssc04625  C-type lectin receptor signaling pathway
ssc04640  Hematopoietic cell lineage
ssc04650  Natural killer cell mediated cytotoxicity
ssc04657  IL-17 signaling pathway
ssc04660  T cell receptor signaling pathway
ssc04664  Fc epsilon RI signaling pathway
ssc04668  TNF signaling pathway
ssc04920  Adipocytokine signaling pathway
ssc04930  Type II diabetes mellitus
ssc04931  Insulin resistance
ssc04932  Non-alcoholic fatty liver disease
ssc04933  AGE-RAGE signaling pathway in diabetic complications
ssc04936  Alcoholic liver disease
ssc04940  Type I diabetes mellitus
ssc05010  Alzheimer disease
ssc05014  Amyotrophic lateral sclerosis
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05132  Salmonella infection
ssc05133  Pertussis
ssc05134  Legionellosis
ssc05135  Yersinia infection
ssc05140  Leishmaniasis
ssc05142  Chagas disease
ssc05143  African trypanosomiasis
ssc05144  Malaria
ssc05145  Toxoplasmosis
ssc05146  Amoebiasis
ssc05152  Tuberculosis
ssc05160  Hepatitis C
ssc05161  Hepatitis B
ssc05163  Human cytomegalovirus infection
ssc05164  Influenza A
ssc05165  Human papillomavirus infection
ssc05166  Human T-cell leukemia virus 1 infection
ssc05168  Herpes simplex virus 1 infection
ssc05169  Epstein-Barr virus infection
ssc05170  Human immunodeficiency virus 1 infection
ssc05171  Coronavirus disease - COVID-19
ssc05205  Proteoglycans in cancer
ssc05310  Asthma
ssc05321  Inflammatory bowel disease
ssc05322  Systemic lupus erythematosus
ssc05323  Rheumatoid arthritis
ssc05330  Allograft rejection
ssc05332  Graft-versus-host disease
ssc05410  Hypertrophic cardiomyopathy
ssc05414  Dilated cardiomyopathy
ssc05417  Lipid and atherosclerosis
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    397086 (TNF)
   04350 TGF-beta signaling pathway
    397086 (TNF)
   04064 NF-kappa B signaling pathway
    397086 (TNF)
   04668 TNF signaling pathway
    397086 (TNF)
   04071 Sphingolipid signaling pathway
    397086 (TNF)
   04150 mTOR signaling pathway
    397086 (TNF)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    397086 (TNF)
   04061 Viral protein interaction with cytokine and cytokine receptor
    397086 (TNF)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    397086 (TNF)
   04217 Necroptosis
    397086 (TNF)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    397086 (TNF)
   04620 Toll-like receptor signaling pathway
    397086 (TNF)
   04621 NOD-like receptor signaling pathway
    397086 (TNF)
   04622 RIG-I-like receptor signaling pathway
    397086 (TNF)
   04625 C-type lectin receptor signaling pathway
    397086 (TNF)
   04650 Natural killer cell mediated cytotoxicity
    397086 (TNF)
   04612 Antigen processing and presentation
    397086 (TNF)
   04660 T cell receptor signaling pathway
    397086 (TNF)
   04657 IL-17 signaling pathway
    397086 (TNF)
   04664 Fc epsilon RI signaling pathway
    397086 (TNF)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    397086 (TNF)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    397086 (TNF)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    397086 (TNF)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    397086 (TNF)
   05170 Human immunodeficiency virus 1 infection
    397086 (TNF)
   05161 Hepatitis B
    397086 (TNF)
   05160 Hepatitis C
    397086 (TNF)
   05171 Coronavirus disease - COVID-19
    397086 (TNF)
   05164 Influenza A
    397086 (TNF)
   05168 Herpes simplex virus 1 infection
    397086 (TNF)
   05163 Human cytomegalovirus infection
    397086 (TNF)
   05169 Epstein-Barr virus infection
    397086 (TNF)
   05165 Human papillomavirus infection
    397086 (TNF)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    397086 (TNF)
   05135 Yersinia infection
    397086 (TNF)
   05133 Pertussis
    397086 (TNF)
   05134 Legionellosis
    397086 (TNF)
   05152 Tuberculosis
    397086 (TNF)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    397086 (TNF)
   05144 Malaria
    397086 (TNF)
   05145 Toxoplasmosis
    397086 (TNF)
   05140 Leishmaniasis
    397086 (TNF)
   05142 Chagas disease
    397086 (TNF)
   05143 African trypanosomiasis
    397086 (TNF)
  09163 Immune disease
   05310 Asthma
    397086 (TNF)
   05322 Systemic lupus erythematosus
    397086 (TNF)
   05323 Rheumatoid arthritis
    397086 (TNF)
   05321 Inflammatory bowel disease
    397086 (TNF)
   05330 Allograft rejection
    397086 (TNF)
   05332 Graft-versus-host disease
    397086 (TNF)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    397086 (TNF)
   05014 Amyotrophic lateral sclerosis
    397086 (TNF)
   05020 Prion disease
    397086 (TNF)
   05022 Pathways of neurodegeneration - multiple diseases
    397086 (TNF)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    397086 (TNF)
   05418 Fluid shear stress and atherosclerosis
    397086 (TNF)
   05410 Hypertrophic cardiomyopathy
    397086 (TNF)
   05414 Dilated cardiomyopathy
    397086 (TNF)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    397086 (TNF)
   04940 Type I diabetes mellitus
    397086 (TNF)
   04936 Alcoholic liver disease
    397086 (TNF)
   04932 Non-alcoholic fatty liver disease
    397086 (TNF)
   04931 Insulin resistance
    397086 (TNF)
   04933 AGE-RAGE signaling pathway in diabetic complications
    397086 (TNF)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    397086 (TNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    397086 (TNF)
   00536 Glycosaminoglycan binding proteins [BR:ssc00536]
    397086 (TNF)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Tumor necrosis fators
   397086 (TNF)
Glycosaminoglycan binding proteins [BR:ssc00536]
 Heparan sulfate / Heparin
  Cytokines
   397086 (TNF)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 397086
NCBI-ProteinID: NP_999187
Ensembl: ENSSSCG00000001404
Vega: OTTSUSG00000001322
UniProt: P23563 B3GDZ6
Position
7:23699635..23702393
AA seq 232 aa
MSTESMIRDVELAEEALAKKAGGPQGSRRCLCLSLFSFLLVAGATTLFCLLHFEVIGPQK
EEFPAGPLSINPLAQGLRSSSQTSDKPVAHVVANVKAEGQLQWQSGYANALLANGVKLKD
NQLVVPTDGLYLIYSQVLFRGQGCPSTNVFLTHTISRIAVSYQTKVNLLSAIKSPCQRET
PEGAEAKPWYEPIYLGGVFQLEKDDRLSAEINLPDYLDFAESGQVYFGIIAL
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagcactgagagcatgatccgagacgtggagctggcggaggaggcgctcgccaagaag
gccgggggcccccagggctccaggaggtgcctgtgcctcagcctcttctccttcctcctg
gtcgcaggagccaccacgctcttctgcctactgcacttcgaggttatcggcccccagaag
gaagagtttccagctggccccttgagcatcaaccctctggcccaaggactcagatcatcg
tctcaaacctcagataagcccgtcgcccacgttgtagccaatgtcaaagccgagggacag
ctccaatggcagagtgggtatgccaatgccctcctggccaacggcgtgaagctgaaagac
aaccagctggtggtgccgacagatgggctgtacctcatctactcccaggtcctcttcagg
ggccaaggctgcccttccaccaacgttttcctcactcacaccatcagccgcatcgccgtc
tcctaccagaccaaggtcaacctcctctctgccatcaagagcccttgccagagggagacc
cccgagggggccgaggccaagccctggtacgaacccatctacctgggaggggtcttccag
ctggagaaggatgatcgactcagtgccgagatcaacctgcccgactatctggactttgct
gaatctgggcaggtctattttgggatcattgccctgtga

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