KEGG   Sus scrofa (pig): 397228
Entry
397228            CDS       T01009                                 
Symbol
NR1I2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
  KO
K08540  pregnane X receptor
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    397228 (NR1I2)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ssc03310]
    397228 (NR1I2)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    397228 (NR1I2)
Nuclear receptors [BR:ssc03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   397228 (NR1I2)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 397228
NCBI-ProteinID: NP_001033094
Ensembl: ENSSSCG00000011890
UniProt: Q2V0W2
Position
13:complement(140373571..140406129)
AA seq 421 aa
MQCNETDSTSGNSTTNADEEDEGPQICRVCGDKATGYHFNVMTCEGCKGFFRRAIKRNAR
PRCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIG
AQPPGAKGLTEEQRTMISELMNVQMKTFDTTFTHFKNFRLPEVLSSSLEIPECLQTPSSR
EEAAKWSKLREDLCSVKLSLQLRGEDGSVWNYKPPADNSGKEIFSLLPHIADMSTYMFKG
IINFAKVISYFRDLPIEDQISLLKGATFELCQLRFNTVFNAETGTWECGRLSYSLEDPSG
GFQQLLLQPMLKFHYMLKKLQLHKEEYVLMQAISLFSPDRPGVVQRQVVDQLQERFAITL
KAYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFSITE
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaatgcaatgaaacagactccacttctggaaattccaccaccaatgcagatgaggaa
gatgagggtccccagatctgccgtgtatgtggggacaaggccactggttatcatttcaat
gttatgacatgtgaaggatgcaagggctttttcaggagggccatcaaacgcaatgcccgg
ccccggtgcctcttccggaagggcgcctgcgagatcacccggaagactcggcggcagtgc
caggcctgccgcctccgcaagtgtctggaaagcggcatgaggaaggaaatgatcatgtca
gatgcagctgtggagcagaggcgggccttgatcaggaggaagaaacgagaacagatcggg
gctcagcccccaggagccaagggtctcactgaagagcagcggacaatgatcagtgagctg
atgaacgttcagatgaaaacctttgacaccaccttcacacatttcaagaattttcggtta
ccagaggtgcttagcagtagcctcgagattccagagtgtctgcagactccgtcgtcaagg
gaagaagctgccaagtggagcaagctcagggaagatctgtgctcagtgaaactctctctg
cagctaaggggggaagatggtagcgtctggaactacaaacccccagcagacaacagtggg
aaagagatcttttccctgctgccccacatagctgacatgtcaacctacatgttcaaaggc
attatcaactttgccaaagtcatctcctacttcagggacttgcccattgaggaccagatc
tctctgctgaagggggccacctttgagctgtgccagctgagattcaacacggtgttcaac
gcagagacggggacctgggagtgtggtcggctgtcctacagcttggaagacccctcaggt
ggcttccagcagcttctcctgcagcccatgctgaaattccactacatgctgaagaagctg
cagctgcataaggaggagtatgtgctgatgcaggccatctcccttttctctccagaccgc
ccgggtgtggtgcaacgccaagtggtggaccagctgcaggagaggtttgccattaccctg
aaggcctacatcgagtgcaaccggccccagcctgcccaccgattcctgttcctgaagatc
atggctatgctcactgagctccgcagcatcaacgcccaacacacccagcggctgctgcga
atccaggacatacaccccttcgccaccccactcatgcaggagttattcagcatcacagaa
agctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (30)   
   RefSeq(nuc) (8)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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