KEGG   Sus scrofa (pig): 397285
Entry
397285            CDS       T01009                                 
Symbol
ITGAV
Name
(RefSeq) integrin alpha-V precursor
  KO
K06487  integrin alpha V
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04145  Phagosome
ssc04148  Efferocytosis
ssc04151  PI3K-Akt signaling pathway
ssc04510  Focal adhesion
ssc04512  ECM-receptor interaction
ssc04514  Cell adhesion molecules
ssc04810  Regulation of actin cytoskeleton
ssc04820  Cytoskeleton in muscle cells
ssc04919  Thyroid hormone signaling pathway
ssc05163  Human cytomegalovirus infection
ssc05165  Human papillomavirus infection
ssc05200  Pathways in cancer
ssc05205  Proteoglycans in cancer
ssc05222  Small cell lung cancer
ssc05410  Hypertrophic cardiomyopathy
ssc05412  Arrhythmogenic right ventricular cardiomyopathy
ssc05414  Dilated cardiomyopathy
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    397285 (ITGAV)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    397285 (ITGAV)
   04514 Cell adhesion molecules
    397285 (ITGAV)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    397285 (ITGAV)
   04148 Efferocytosis
    397285 (ITGAV)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    397285 (ITGAV)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    397285 (ITGAV)
   04810 Regulation of actin cytoskeleton
    397285 (ITGAV)
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    397285 (ITGAV)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    397285 (ITGAV)
   05205 Proteoglycans in cancer
    397285 (ITGAV)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    397285 (ITGAV)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    397285 (ITGAV)
   05165 Human papillomavirus infection
    397285 (ITGAV)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    397285 (ITGAV)
   05410 Hypertrophic cardiomyopathy
    397285 (ITGAV)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    397285 (ITGAV)
   05414 Dilated cardiomyopathy
    397285 (ITGAV)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    397285 (ITGAV)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    397285 (ITGAV)
   04515 Cell adhesion molecules [BR:ssc04515]
    397285 (ITGAV)
   04090 CD molecules [BR:ssc04090]
    397285 (ITGAV)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    397285 (ITGAV)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   397285 (ITGAV)
  Exosomal proteins of epithelial cells
   397285 (ITGAV)
Cell adhesion molecules [BR:ssc04515]
 Integrins
  Integrin alpha subunits
   397285 (ITGAV)
CD molecules [BR:ssc04090]
 Proteins
  397285 (ITGAV)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 LYRIC
Other DBs
NCBI-GeneID: 397285
NCBI-ProteinID: NP_001077401
Ensembl: ENSSSCG00000016027
Vega: OTTSUSG00000002194
UniProt: A2RQD8 A0A4X1TWU5
Position
15:91604666..91711843
AA seq 1046 aa
MASLPRRRLRLRPRRLLLLLPGFLLPLCGAFNLDVDSPAEYSGPEGSYFGFAVDFFVPSA
SSMFLLVGAPKANTTQPGIVEGGQVLKCDWSSHRGCQPIEFDATGNRDYAKDDPLEFKSH
QWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSKNIDADG
QGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPKVYSIKYNNQLATR
TAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLHNFTGEQ
MAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQKASGNFQTTKL
NGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRPTGLNAVPSQIL
EGKWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAVLYRARPVITVNAGLEVYP
SILNQDNKTCPLPGTDLKVSCFHVRFCLKADGKGTLPTKLNFQVELLLDKLKQKGAIRRA
LFLHNRFPGHSKNMTISRGGQMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYTTAADV
TGLQPILNQFTPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYVGDDNPLTLIVKA
QNQGEGAYEAELIVSIPPQADFIGVVRNSEALARLSCAFKTENQTRQVVCDLGNPMKAGT
QLLAGLRFSVQQQSEMDTSVKFDLQIQSSNLFDKVSPVVSYKVDLAVLAAVEIRGVSSPD
HIFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLNLQWPYKYNNNTLLYI
LQYDIDGPMNCTSDMEINPLRIKISNSQTEKNDTVGGQGDRNHLVTKRDLTLIEGDVHTL
GCGIAECLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFP
YKNLPIEDIFNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFK
RVRPPQEEQEREQLQPHENGEGNSET
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggcttctctgccgcggcgacggctgcgccttcgcccccgccgcctcttgctccttctc
cccggattcttgttgcctctgtgcggcgccttcaacctagacgtggacagtcctgcggag
tactccggccccgaaggaagttacttcgggttcgcggttgatttcttcgttcccagcgcg
tcttcgatgtttcttctggtgggagcacccaaagcaaacactacccagcctgggattgtg
gagggagggcaagtcctcaagtgtgactggtcttctcaccgggggtgccagccaattgaa
tttgatgcaacaggcaacagagactatgccaaggatgatccattggagtttaagtcccac
cagtggtttggagcatctgtgaggtcaaaacaggataaaattttggcttgtgctccgcta
tatcactggaggactgaaatgaaacaggagagagagcctgttggaacttgctttcttcag
gacggaacaaagactgttgagtatgctccatgcagatcaaaaaatattgatgctgatgga
cagggattttgtcaaggaggattcagcattgattttactaaagctgacagagtacttctt
ggtggtcctggtagcttttattggcaaggtcagctcatttcagatcaagtagcagaaatt
gtatctaaatatgatcccaaagtttacagcatcaagtataataaccagttagcaactcgg
actgcacaagctatttttgatgacagttatttgggctactcagtggctgttggagatttc
aacggtgatggcatagatgactttgtttcgggagttccaagagcagcgaggactttggga
atggtttatatttatgatgggaaaaacatgtcctccttacacaattttactggtgaacag
atggctgcatattttggattttctgtcgctgccactgacattaatggggatgattacgct
gatgtgtttattggagcgcctctattcatggatcgtggttctgacggcaaactccaggaa
gtgggacaagtctcagtgtctctgcagaaagcttcgggaaacttccaaacgaccaagctg
aatgggtttgaggtcttcgcgaggtttggcagtgccatagcccctttgggagatctggac
caggatggctttaatgatattgcaattgctgctccatatgggggtgaagataaaaaagga
attgtttatattttcaacggaagacccacaggcttgaatgcggtaccatctcagatcctt
gaagggaagtgggctgctcggagcatgccaccaagcttcggctattcaatgaaaggagcc
acggacatagacaagaatggatatccagacttaattgtgggagcttttggtgtagataga
gctgtgttatacagggccagaccagttatcactgtaaatgctggccttgaagtgtaccct
agtattttaaatcaagacaataaaacctgcccactgcctgggacagatctcaaagtttcc
tgttttcatgtcaggttctgcttaaaggcggatggcaaaggaacacttcccacgaaactt
aacttccaggtggagcttcttttggataaactcaagcagaaaggagcaattcgacgagcg
ctgtttctccataacaggttcccgggtcactccaagaacatgaccatctctaggggggga
cagatgcagtgtgaggaactgatagcatatctgcgggatgaatctgaatttagagacaaa
ctcactcccattactatttttatggagtatcgactggattatacaacagctgctgatgta
acaggcttgcaacccattcttaaccaattcactcctgccaacattagtcgacaggctcat
atactacttgactgtggtgaagacaatgtctgtaaacctaaacttgaagtttctgtagat
agtgatcaaaagaagatctatgttggggatgacaaccctctgaccttaattgttaaggct
caaaatcaaggagaaggtgcctatgaagctgagctcatcgtttctattccaccgcaggct
gatttcatcggggtagtccgcaacagtgaagccttagcaagactttcctgtgcatttaag
acagaaaaccaaacccgccaggtggtatgtgaccttggaaacccaatgaaggctggaact
caactcttagctggtcttcgtttcagtgtgcagcagcaatcagagatggatacttctgtt
aaatttgatttacaaatccaaagctccaatctttttgacaaagtaagcccggttgtatct
tacaaagttgaccttgctgttttagctgctgttgagataagaggagtctcaagtcccgat
catatctttcttccaattccaaattgggagcacaaggagaaccctgagactgaggaagac
gttgggccagttgttcagcacatctatgagctgagaaacaatggtccaagttcattcagc
aaggcaatgctaaatcttcagtggccttacaaatataacaacaacactttgttgtacatc
cttcaatatgatattgatgggccaatgaactgcacttcagatatggagatcaaccctttg
agaattaagatctcaaattcacagactgaaaagaatgacacagttggtgggcagggtgac
cggaaccatcttgtcactaagcgggatctcaccctcattgagggagatgttcacactttg
ggttgtggaattgctgaatgcttgaagattgtctgccaggtggggcgactagacagagga
aagagtgcaatcctgtatgtaaagtctctactgtggaccgagacctttatgaataaagaa
aaccagaatcattcatattctctaaagtcatctgcttcatttaatgtcatagagtttcct
tataagaaccttccaattgaggacattttcaactctacattagttaccactaatgttacc
tggggcattcagccagcacccatgccggtgcctgtgtgggtgatcattttagcagttcta
gcgggattgttgttactggctgttttggtatttgtaatgtacaggatgggcttttttaaa
cgtgtccgaccacctcaagaagaacaggaaagggaacagcttcagcctcatgaaaatggt
gaaggaaactcagaaacttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (22)   
   RefSeq(nuc) (6)   
   GenBank (8)   
   EMBL (8)   
Protein domain (8)   
   Pfam (8)   
All databases (71)   

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