KEGG   Sus scrofa (pig): 397320
Entry
397320            CDS       T01009                                 
Symbol
MMP1
Name
(RefSeq) interstitial collagenase precursor
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03320  PPAR signaling pathway
ssc04657  IL-17 signaling pathway
ssc04926  Relaxin signaling pathway
ssc05171  Coronavirus disease - COVID-19
ssc05200  Pathways in cancer
ssc05219  Bladder cancer
ssc05323  Rheumatoid arthritis
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    397320 (MMP1)
  09152 Endocrine system
   03320 PPAR signaling pathway
    397320 (MMP1)
   04926 Relaxin signaling pathway
    397320 (MMP1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    397320 (MMP1)
  09162 Cancer: specific types
   05219 Bladder cancer
    397320 (MMP1)
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    397320 (MMP1)
  09163 Immune disease
   05323 Rheumatoid arthritis
    397320 (MMP1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    397320 (MMP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    397320 (MMP1)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     397320 (MMP1)
Peptidases and inhibitors [BR:ssc01002]
 Metallo peptidases
  Family M10
   397320 (MMP1)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_5 Reprolysin_3 Peptidase_M66 Reprolysin_4 DUF4953 Metallopep Peptidase_M54
Other DBs
NCBI-GeneID: 397320
NCBI-ProteinID: NP_001159701
Ensembl: ENSSSCG00000014985
UniProt: P21692 C9VZX3
Structure
Position
9:complement(33411738..33420205)
AA seq 469 aa
MFSLLLLLLLLCNTGSHGFPAATSETQEQDVEIVQKYLKNYYNLNSDGVPVEKKRNSGLV
VEKLKQMQQFFGLKVTGKPDAETLNVMKQPRCGVPDVAEFVLTPGNPRWENTHLTYRIEN
YTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN
LAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNY
IYTGDVQLSQDDIDGIQAIYGPSENPVQPSGPQTPQVCDSKLTFDAITTLRGELMFFKDR
FYMRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYWAVRGQDVLYGY
PKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMIAEEFP
GIGNKVDAVFQKDGFLYFFHGTRQYQFDFKTKRILTLQKANSWFNCRKN
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgttcagcctgcttctgctgctgctgcttctctgcaacacagggtcccacggcttccca
gcagcaacttcagaaacacaagagcaagatgtggagatagtgcagaaatacctgaaaaac
tactacaacctgaatagtgatggggtgccagtggaaaagaaaaggaacagtggcctcgta
gttgaaaaactaaagcaaatgcaacaattctttgggctgaaagtaacggggaaaccagac
gctgaaactctgaatgtgatgaagcagcccagatgtggagttcctgacgtggctgagttt
gttctcactccagggaaccctcggtgggagaacacacacctgacctacaggattgaaaat
tacacaccagatctgtcaagagaagatgtggaccgtgccattgagaaagcctttcaactc
tggagcaatgtctcacccttgaccttcaccaaggtctccgagggtcaagcagacataatg
atatcctttgtcaggggagatcatcgtgacaattctccctttgatggacctggaggaaac
cttgctcatgcttttcagccaggcccaggtattggaggggatgctcattttgatgaagat
gaaaggtggaccaaaaatttcagagattataacttgtatcgtgtggctgctcatgaactg
ggccattcccttggcctttctcattccactgacattggggctttgatgtaccccaactac
atctacactggtgatgttcagctgtcccaagatgacattgayggcatccaggccatctat
ggaccttccgaaaaccccgttcagccaagtggcccacaaaccccacaagtgtgtgatagt
aagctaacttttgatgctataactacacttcggggagaactaatgttctttaaagacagg
ttctacatgcgcacaaattccttctaccctgaagtggagctcaatttcatttctgtgttc
tggccacaagtgccaaatggacttcaagctgcttatgagattgccgatagagatgaagtc
cggtttttcaaaggtaacaagtactgggctgttagggggcaggatgtgctatacggatac
cccaaggacatccacagatcctttggcttccctagtactgtgaagaatatcgatgctgct
gtttttgaggaagatactgggaaaacatacttctttgttgctcacgaatgctggaggtat
gatgaatataaacaatccatggatacaggttatcccaaaatgatagcagaagaatttcct
gggattggcaacaaagttgatgctgttttccagaaagacggatttctatatttcttccat
ggaacaaggcagtaccaatttgatttcaaaacgaagagaattttgactctccaaaaagct
aatagctggttcaactgcagaaaaaattga

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