KEGG   Sus scrofa (pig): 397349
Entry
397349            CDS       T01009                                 
Symbol
CAPN3
Name
(RefSeq) calpain-3
  KO
K08573  calpain-3 [EC:3.4.22.54]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    397349 (CAPN3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    397349 (CAPN3)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.54  calpain-3
     397349 (CAPN3)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C2: calpain family
   397349 (CAPN3)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III Calpain_u2 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5
Other DBs
NCBI-GeneID: 397349
NCBI-ProteinID: NP_999336
Ensembl: ENSSSCG00000004728
UniProt: P43368
Position
1:complement(128960117..129013508)
AA seq 822 aa
MPTVISASMAPRTGAEPRSPGPMPQAAQGKGTEAGVGNPGGKYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNKRLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMKKAIERGSLMGCSIDDGTNMTYGTSPSGLKMGDLIARMVRNMDESRLR
DSDLIPEGCSDDRPTRTIVPVQFETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNP
WGQVEWNGSWSDSWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFIYHFTKLEICNLTAD
ALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICS
FLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSRTYIN
MREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVRKKKT
KPIIFVSDRANSNKELGVDQESEEGQDKTSPDKQEKSPKPEPSNTDQESEEQQQFRNIFR
QIAGDDMEICADELKNVLNRVVNKHKDLKTEGFTLESCRSMIALMDTDGSGRLNLQEFHH
LWKKIKSWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKYMNIDF
DSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgccgactgtcattagcgcgtctatggccccacggacaggggccgagcccaggtcccca
ggaccgatgccccaggcggcccagggcaagggcacggaggccggggttggaaacccaggt
ggtaaatactcagccatcatcagccgcaattttcccattattggcgtgaaagagaagaca
tttgagcagcttcacaagaaatgcctagaaaagaaggttctttatctggatcctgagttc
ccaccggacgagacctcgctcttttatagccagaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatccccgatttatcattggtggagccaacagaactgac
atctgtcaaggagacctaggggactgctggtttctggcagccatcgcttgcctgaccctc
aacaagcgtctgcttttccgagtcataccccatgatcagagtttcaccgaaaactacgca
gggatctttcacttccagttctggcgctacggagactgggtggacgtggttattgatgac
tgcctgccaacttacaacaatcaactggttttcaccaaatccaaccaccgcaatgagttc
tggagtgctctgctggagaaggcttatgctaagctccatggttcatacgaagccctgaaa
ggtggaaacactacagaggccatggaggacttcacaggaggagtgacagagttttttgaa
atcaaagatgctcccagagacatgtacaagatcatgaagaaagccatcgagaggggctcc
ctcatgggctgctccattgatgatggcacaaacatgacctatggaacctctccttctggg
ctgaaaatgggggatttgattgcacggatggtgaggaacatggacgagtcgcggctcagg
gactcagacctcatccctgagggatgctcagatgacagaccgacccggacaattgttcct
gttcagttcgagacaagaatggcctgtgggctggtcaaaggccacgcctattcggttact
gggctggaggaggccctgttcaagggtgaaaaggtgaagcttgtgcggctgcggaacccc
tggggccaggtggagtggaatggctcctggagtgacagttggaaggactggagctttgtg
gacaaagatgagaaggcccgtctgcagcaccaggtcactgaggatggagagttctggatg
tcttatgatgatttcatctaccatttcacaaagctggagatctgcaacctcacagctgat
gccctggagtccgacaagcttcagacttggacagtgtctgtgaacgagggccgctgggtg
aggggctgctctgccggaggctgtcgcaacttcccagacactttctggaccaacccacag
taccgtctgaagctcctggaggaggatgatgaccctgacgactccgaggtgatctgcagc
ttcctggtagcactgatgcagaagaaccggcggaaggaccggaagctgggggccaacctc
ttcaccatcggcttcgccatctacgaggtccccaaagagatgcatggaaacaagcagcac
ttgcagaaggacttcttcctgtacaatgcctccaaggctaggagcagaacctacattaac
atgcgggaggtgtccgagcgcttccgcctgccccccagcgagtacgtcattgtgccctcc
acctatgagccccaccaggagggggaattcatcctccgggtcttctccgaaaagaggaac
ctctctgaggaagttgaaaataccatctctgtggatcgaccagtgagaaagaaaaaaacc
aagcccatcatcttcgtttcagacagagcaaacagcaacaaggagttgggtgtggaccag
gaatcagaggagggccaagacaaaacaagccctgataaacaagagaaatccccaaagcca
gagcccagcaacactgaccaggaaagtgaggaacagcagcaattccggaacattttcagg
cagatagcaggcgatgacatggagatctgtgcagatgagctcaagaatgtccttaacaga
gtggtgaacaaacataaggacctgaagactgaagggttcacattggagtcctgccgtagc
atgattgctctcatggatacagacggctctggaagactgaacctgcaagagttccaccac
ctctggaagaagattaaatcctggcagaaaattttcaagcattatgacaccgaccaatcc
ggcaccatcaacagctatgagatgcgaaatgcagtcaatgacgcaggcttccacctcaac
aaccagctctatgacatcatcaccatgcggtacgcagacaagtacatgaacatcgacttt
gacagttttatctgctgcttcgtcaggctggagggcatgttcagagcttttaatgccttt
gacaaggatggagatggtatcatcaaactcaatgttctagagtggctgcagctcaccatg
tatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (22)   
   RefSeq(nuc) (10)   
   GenBank (6)   
   EMBL (6)   
Protein domain (8)   
   Pfam (8)   
All databases (63)   

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