KEGG   Sus scrofa (pig): 397387
Entry
397387            CDS       T01009                                 
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor alpha
  KO
K05547  thyroid hormone receptor alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    397387 (THRA)
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    397387 (THRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    397387 (THRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ssc03310]
    397387 (THRA)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    397387 (THRA)
Nuclear receptors [BR:ssc03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   397387 (THRA)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 397387
NCBI-ProteinID: NP_999355
UniProt: O97716 A0A480Q663
Position
12:complement(22270506..22296684)
AA seq 410 aa
MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKA
TGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGM
AMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHVATEAHRSTNA
QGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFS
ELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIF
ELGKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNI
PHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggaacagaagccaagcaaggtggagtgtgggtcagacccagaggagaacagtgccagg
tcaccagatggaaagcgaaaaagaaagaacggccaatgttccctgaaaaccagcatgtca
gggtatatccctagttacctggacaaagacgagcagtgtgtcgtgtgtggggacaaggca
accggttatcactaccgctgcatcacttgtgagggctgcaagggcttctttcgccgcaca
atccagaagaatctccatcccacctactcatgcaagtatgacagctgctgtgtcattgac
aagatcacccgcaatcagtgccagctgtgccgcttcaagaagtgcatcgctgtgggcatg
gccatggacttggttctagatgattcgaagcgggtggccaagcgcaagctgatcgagcag
aaccgggagcggcgcaggaaggaggagatgatccgatcactgcagcagcgaccggagccc
actccggaagagtgggacctgatccacgttgccacggaggcccatcgcagcacaaacgcc
cagggcagccactggaagcagaggaggaaattcctgccggatgacattggccagtcaccc
atcgtctccatgccggacggagacaaggtggacctagaggccttcagtgagtttaccaag
atcatcaccccggccatcacccgcgtggtggactttgccaaaaaactgcccatgttctcc
gagctgccttgcgaagaccagatcatcctcctgaaggggtgctgcatggagatcatgtct
ctgcgggcggctgtccgctatgaccccgagagcgacacactgacgctgagcggggagatg
gccgtcaagcgggagcagctcaagaatggcggcctgggcgtcgtctccgacgccatcttt
gaactgggcaagtcactctctgcctttaacctggacgacacggaagtggctctgctgcag
gctgtgctgctaatgtcaacagaccgctcgggcctgctgtgcgtggacaagatcgagaag
agtcaggaggcgtacctgctggcgttcgagcactacgtcaaccaccgcaaacacaacatt
ccgcacttctggcccaagctgctgatgaaggtgactgacctccgcatgatcggggcctgc
cacgccagccgcttcctccacatgaaagtcgagtgccccaccgaactcttccccccactc
ttcctcgaggtctttgaggatcaggaagtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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