KEGG   Sus scrofa (pig): 397508
Entry
397508            CDS       T01009                                 
Symbol
SELE
Name
(RefSeq) E-selectin precursor
  KO
K06494  selectin, endothelial cell
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04514  Cell adhesion molecules
ssc04668  TNF signaling pathway
ssc04933  AGE-RAGE signaling pathway in diabetic complications
ssc05143  African trypanosomiasis
ssc05144  Malaria
ssc05417  Lipid and atherosclerosis
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    397508 (SELE)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    397508 (SELE)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    397508 (SELE)
   05143 African trypanosomiasis
    397508 (SELE)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    397508 (SELE)
   05418 Fluid shear stress and atherosclerosis
    397508 (SELE)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    397508 (SELE)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    397508 (SELE)
   04090 CD molecules [BR:ssc04090]
    397508 (SELE)
   04091 Lectins [BR:ssc04091]
    397508 (SELE)
Cell adhesion molecules [BR:ssc04515]
 Selectins
  Selectin family
   397508 (SELE)
CD molecules [BR:ssc04090]
 Proteins
  397508 (SELE)
Lectins [BR:ssc04091]
 C-Type lectins
  Group 4: Selectins
   397508 (SELE)
SSDB
Motif
Pfam: Sushi Lectin_C EGF hEGF EGF_2 C8A_B_C6_EGF-like EGF_3
Other DBs
NCBI-GeneID: 397508
NCBI-ProteinID: NP_999433
Ensembl: ENSSSCG00000006286
Vega: OTTSUSG00000002003
UniProt: P98110
Position
4:81289061..81299657
AA seq 484 aa
MIASQFLSALPLVLLLLRESGAWSYSASTETMTFDDASAYCQQRYTHLVAIQNHAEIEYL
NSTFNYSASYYWIGIRKINGTWTWIGTKKALTPEATNWAPGEPNNKQSNEDCVEIYIKRD
KDSGKWNDERCSKKKLALCYTAACTPTSCSGHGECIETINSSTCQCYPGFRGLQCEQVVE
CDALENPVNGVVTCPQSLPWNTTCAFECKEGFELIGPEHLQCTSSGSWDGKKPTCKAVTC
DTVGHPQNGDVSYNHSSIGEFAYKSTCHFTCAEGFGLQGPAQIECTAQGQWTQQAPVCKA
VKCPAVSQPKNGFVKFTHSPNGEFTYNSSCAFSCEEGFELRGSAQLACTSQGQWTQEVPS
CQAVQCSSLEVPREINMSCSGEPMFGAVCTFACPEGWMLNGSVALTCGATGHWSGMLPTC
EAPAESKIPLAMGLAAGGVSFMTSASFLLWLLKRLRKRAKKFVPSSSSECLQPNGSYQMP
SDLI
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgattgcttcacagtttctctctgctctccctttggtgcttctcctgcttagagaaagt
ggagcctggtcttacagcgcctctacagaaaccatgacttttgatgatgccagtgcttat
tgccagcagaggtacacacatctggtcgcaattcaaaaccatgcagagattgaatacctg
aactccacgttcaactattcagcaagttactactggattggaatcaggaagatcaatggt
acatggacatggatagggaccaagaaggccttgaccccagaggccaccaactgggctcca
ggtgaaccaaataataagcaaagcaacgaggactgtgtagagatctacatcaagagagac
aaggactcgggcaagtggaatgatgagagatgcagcaaaaagaagctcgccttgtgctac
acagctgcctgtacccctacatcctgcagcggccatggtgaatgcatagagaccatcaat
agctctacttgccagtgctaccctggcttccgaggcctccagtgtgagcaagtggttgag
tgtgatgctttggaaaatcctgtcaacggagtcgtgacatgtccccaaagcctcccatgg
aacacaacctgtgcatttgagtgtaaggaaggatttgaactcatcggacctgagcacctg
caatgtacctcatctgggagctgggacggcaagaagccaacgtgtaaagctgtgacatgt
gacaccgtcggccatcctcagaatggtgatgtgagttataaccactcctctattggagag
tttgcctacaagtcaacctgccacttcacctgtgcagaaggcttcgggctgcaggggcca
gcccagattgaatgcactgcccaggggcaatggacccagcaagccccagtttgtaaagct
gtgaaatgtcctgctgtctcccagcccaagaatggcttcgtgaagtttacccattccccc
aatggagagtttacctacaattcctcctgtgccttcagctgtgaggaaggctttgaatta
cgtggatcagctcaacttgcatgcacgtctcaaggacaatggacacaggaggttccctcc
tgccaagcggtacagtgttcaagtttggaggttcccagagagatcaacatgagctgcagt
ggggagcccatgtttggtgctgtgtgtacatttgcctgtcctgaaggatggatgctcaat
ggctctgtagctctgacgtgtggtgccacaggacactggtctgggatgctgcctacttgt
gaagctcctgctgagtccaaaattcccttggcaatgggacttgctgctggtggagtctcc
ttcatgacatcagcatcatttctcctctggctcctgaaacgccttcggaagagagcaaaa
aaatttgttccttccagcagctccgaatgccttcaacccaatggatcctaccaaatgcct
tctgacttaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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