KEGG   Sus scrofa (pig): 397528
Entry
397528            CDS       T01009                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4 precursor
  KO
K16338  syndecan 4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04512  ECM-receptor interaction
ssc04514  Cell adhesion molecules
ssc04820  Cytoskeleton in muscle cells
ssc05205  Proteoglycans in cancer
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    397528 (SDC4)
   04514 Cell adhesion molecules
    397528 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    397528 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    397528 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    397528 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssc00535]
    397528 (SDC4)
Proteoglycans [BR:ssc00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   397528 (SDC4)
SSDB
Motif
Pfam: Syndecan Ac76
Other DBs
NCBI-GeneID: 397528
NCBI-ProteinID: NP_999449
Ensembl: ENSSSCG00000007401
UniProt: Q8HZJ6 A0A480JRC1
Position
17:complement(47650387..47670499)
AA seq 202 aa
MASPRLLALLLLLVGAFNAAAAESIRETEVINPQDLLEGRYFSGDLPDDEDVGGPGQEPD
DFEWSGSGDLEGPEDKHMLPEVTHPLVPLDNHIPERTGPGGRVPTEPKELEENEVIPKRM
SPFDGDEDVSNKVSMSSTAQGSNIFERTEVLSALIVGGIVGILFAVFLVLLLVYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcctcccctcgcctgctcgcgctgctgctgctcctcgtgggggcctttaacgccgcc
gccgccgagtcgatccgagagaccgaggtcatcaacccccaggacctcctagaaggccga
tacttctccggagacctaccggatgacgaggatgttggggggccggggcaggaacctgat
gactttgagtggtctggctctggagatctggagggtccagaggacaagcatatgctcccg
gaagtgacacaccccttggtgcctctagacaaccacatccctgagaggaccggacccggg
ggccgggtccccaccgaacccaaggaactggaggagaatgaggtcattcccaagaggatg
tccccctttgatggggacgaggatgtgtccaacaaggtgtccatgtccagcaccgcccag
ggcagcaacatcttcgagaggacagaggttctgtcagctctgattgtgggcggcatcgtg
ggcatcctctttgctgttttcctggtcctgctgctggtgtatcggatgaagaagaaggac
gagggcagctacgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttc
tacgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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