KEGG   Sus scrofa (pig): 397576
Entry
397576            CDS       T01009                                 
Symbol
APOE
Name
(RefSeq) apolipoprotein E precursor
  KO
K04524  apolipoprotein E
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04979  Cholesterol metabolism
ssc05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    397576 (APOE)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    397576 (APOE)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    397576 (APOE)
   00536 Glycosaminoglycan binding proteins [BR:ssc00536]
    397576 (APOE)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   397576 (APOE)
Glycosaminoglycan binding proteins [BR:ssc00536]
 Heparan sulfate / Heparin
  Others
   397576 (APOE)
SSDB
Motif
Pfam: Apolipoprotein ApoLp-III Laminin_I Baculo_PEP_C Exonuc_VII_L CCDC90-like BAR_3 YtxH PIN_8 DUF6079 V-ATPase_G CHASE6_C Phasin CCDC138_cc Prominin AKNA DUF4618 ISG65-75 DUF883 DUF1690
Other DBs
NCBI-GeneID: 397576
NCBI-ProteinID: NP_999473
Ensembl: ENSSSCG00000003088
UniProt: P18650
Position
6:51373113..51375333
AA seq 317 aa
MRVLWVALVVTLLAGCRTEDEPGPPPEVHVWWEESKWQGSQPWEQALGRFWDYLRWVQSL
SDQVQEELLSTKVTQELTELIEESMKEVKAYREELEAQLGPVTQETQARLSKELQAAQAR
VGADMEDVRNRLVLYRSEVHNMLGQTTEELRSRLASHLRNVRKRLVRDTEDLQKRLAVYQ
AGLREGAERSVSALRERLGPLVEQGRLRAATLSTRAGQPLRERAEAWGQKLRGRLEEMGS
RTRDRLDEMRDELEEVRTKVEEQGSQLRLQAEAFQARLKGWFEPLVEDMRRQWAGLVERM
QSAVSISSSTSAPSDNQ
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagggttctgtgggttgctttggtggtaaccctcctcgcaggatgccggacagaggac
gagccggggccgccgccggaggtgcacgtgtggtgggaggagtccaagtggcagggcagc
cagccctgggagcaggccctgggccgcttctgggattacctgcgctgggtgcagtccctg
tctgaccaagtgcaggaggagctgctcagcaccaaggtcacccaggaactgacggagctg
atagaggagagcatgaaggaggtgaaggcctaccgcgaggagctggaggcgcagctgggc
cccgtgacccaggagacgcaggcgcgcctgtccaaggagctgcaggcggcgcaggcccgc
gtgggcgccgacatggaggacgtgcgcaaccgcttggtgctctaccgcagcgaggtgcac
aacatgttgggccagaccaccgaggagctgcggagccgcctggcttcccacctgcgcaac
gtgcgcaagcggctcgtccgcgacaccgaggacctgcagaagcgcctggccgtgtaccag
gcggggctgcgcgagggcgccgagcgcagcgtgagcgccctccgcgagcgcctcgggccc
ctggtggagcagggccgattgcgcgccgccaccctgagtaccagggccggccagccgctg
cgcgagcgcgcggaagcctggggccagaagctgcgcggacggctggaggagatgggcagc
cggacccgcgaccgcctggatgagatgcgtgacgagctggaggaggtgcgcaccaaagtg
gaggagcagggcagccagttgcgcctgcaggccgaggccttccaggcccgcctcaaaggc
tggttcgagcctctggtggaagacatgcggcgccagtgggccgggctggtggagaggatg
cagtcggccgtgagcatcagctcctccacctctgcgcccagtgataatcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (20)   
   Pfam (20)   
All databases (51)   

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