KEGG   Sus scrofa (pig): 397663
Entry
397663            CDS       T01009                                 
Symbol
APP
Name
(RefSeq) amyloid beta A4 protein precursor
  KO
K04520  amyloid beta A4 protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04726  Serotonergic synapse
ssc05010  Alzheimer disease
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09156 Nervous system
   04726 Serotonergic synapse
    397663 (APP)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    397663 (APP)
   05022 Pathways of neurodegeneration - multiple diseases
    397663 (APP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    397663 (APP)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssc00535]
    397663 (APP)
   00536 Glycosaminoglycan binding proteins [BR:ssc00536]
    397663 (APP)
Peptidases and inhibitors [BR:ssc01002]
 Peptidase inhibitors
  Family I2: Kunitz - BPTI family
   397663 (APP)
Proteoglycans [BR:ssc00535]
 Cell surface proteoglycans
  Others
   397663 (APP)
Glycosaminoglycan binding proteins [BR:ssc00536]
 Heparan sulfate / Heparin
  Others
   397663 (APP)
SSDB
Motif
Pfam: APP_E2 APP_N APP_Cu_bd APP_amyloid Beta-APP Kunitz_BPTI Insulin_TMD
Other DBs
NCBI-GeneID: 397663
NCBI-ProteinID: NP_999537
Ensembl: ENSSSCG00000012022
UniProt: P79307 A0A480E073
Position
13:complement(189434854..189716120)
AA seq 770 aa
MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVADVEEE
EAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD
PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL
VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgctgcccggtttggcactggtcctgctggccgcctggacggctagggcgctggaggtg
cccactgatggcaatgccggcctgcttgcagaaccccaggttgccatgttctgtggcaaa
ctcaacatgcacatgaatgtgcagaatgggaagtgggagtcagatccgtcggggaccaaa
acctgcattggcaccaaggaaggcatcttgcagtactgccaagaagtctaccctgaactg
cagatcaccaatgtggtagaagccaaccaaccagtgaccatccagaactggtgcaagagg
agccggaagcagtgcaagacccacactcacattgtgattccgtaccgctgcttagttggc
gagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacaccaggagagg
atggatgtttgcgaaacccaccttcactggcacactgtggccaaagagacctgtagtgag
aagagtacgaacttgcatgactatggcatgttgctgccctgtggaattgacaagttccga
ggggtggagtttgtgtgttgcccactggccgaggaaagtgacaatatcgactcagcagat
gcagaagaggatgactcggacgtctggtggggtggagcagatacagactatgcagatggc
agtgaagacaaagtcgtggaggtcgcagaggaggaggaagtggctgatgtcgaggaagaa
gaagctgaggatgatgaggatgatgaggatggtgatgaggtagaagaagaggctgaggaa
ccctatgaagaggccacggagagaaccaccagcatcgccacaaccaccaccaccaccacg
gagtctgtggaagaggtggtccgagaggtgtgctctgaacaagccgagacggggccgtgc
cgagcaatgatctcccgctggtactttgatgtgactgaagggaagtgcgccccgttcttt
tacggcggatgtggcggcaaccgaaacaactttgacacagaggaatactgcatggccgtg
tgtggcagcgtcatgtcccaaagtttactcaagactacccaggaacatcttccccaagat
cctgttaaacttcctacaacagcagccagcaccccagatgccgttgacaagtatcttgag
acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc
aagcaccgcgagagaatgtcccaggtcatgagagagtgggaagaggcagaacgtcaagca
aagaacttgcctaaagctgataagaaagcagtgatccagcatttccaggagaaagtggag
tctctggagcaggaagcagccaacgagaggcagcagttggtggagacgcacatggccaga
gtggaggccatgcttaacgaccgccggcgcctggccctggagaattacatcacggctctt
caggctgttcctcctcggcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgcc
gaacagaaagacagacagcacaccctaaagcattttgaacacgttcgcatggtagatcca
aagaaagctgctcagatccgatcccaggttatgacacacctccgtgtgatttacgagcgc
atgaaccagtctctctccctgctctacaacgttcctgctgtggctgaggaaattcaggat
gaagttgatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatg
atcagcgaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaacc
aaaaccaccgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccc
tggcatccttttggggtagactctgtgcctgccaacacagaaaatgaagtcgagcctgtt
gacgcccgccctgcagccgaccgaggactgaccactcgaccaggttccgggttgaccaac
atcaagacggaagagatctctgaagtgaagatggatgcggagttccgacacgattcaggc
tatgaggttcatcaccaaaaactggtgttcttcgcagaagatgtgggttcaaacaaaggt
gccatcattggactcatggtgggtggtgttgtcatagcaaccgtgattgtcatcacctta
gtgatgctgaagaagaaacagtacacatccatccatcacggtgtggtggaggttgacgca
gctgtgaccccggaggagcgccacctctccaagatgcagcagaatggctatgaaaaccca
acttacaagttctttgagcagatgcagaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (44)   
   RefSeq(nuc) (8)   
   GenBank (18)   
   EMBL (18)   
Protein domain (7)   
   Pfam (7)   
All databases (81)   

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