KEGG   Sus scrofa (pig): 407604
Entry
407604            CDS       T01009                                 
Symbol
MYOD1
Name
(RefSeq) myoblast determination protein 1
  KO
K09064  myogenic factor 3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    407604 (MYOD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    407604 (MYOD1)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Myogenic transcription factors
    407604 (MYOD1)
SSDB
Motif
Pfam: Basic Myf5 HLH
Other DBs
NCBI-GeneID: 407604
NCBI-ProteinID: NP_001002824
Ensembl: ENSSSCG00000013375
Vega: OTTSUSG00000001447
UniProt: P49811 D2KPI9
Position
2:complement(41422522..41424236)
AA seq 319 aa
MELLSPPLRDVDLTGPDGSLCNFATADDFYDDPCFDSPDLRFFEDLDPRLVHVGALLKPE
EHSHFPAAAHPAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR
RLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYA
PGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYDGTYYSEAPSEPRP
GKNAAVSSLDCLSSIVESISTESPAAPALLLADTPRESSPGPQEAAAGSEVERGTPTPSP
DAAPQCPASANPNPIYQVL
NT seq 960 nt   +upstreamnt  +downstreamnt
atggagctgctgtcgccaccgctccgcgacgtagatttgacgggccccgacggctctctc
tgcaactttgcaacagcggacgacttctatgatgacccgtgtttcgactccccggacctg
cgcttcttcgaggacctggacccgcgcctcgtgcacgtgggcgcgctcctaaagcccgag
gaacactcgcacttccctgccgcagcgcacccggccccgggagctcgtgaggacgagcat
gtgcgcgcgcccagcgggcaccaccaggcgggccgctgtctactgtgggcctgcaaggcg
tgcaaacgcaagaccactaacgccgaccgccgcaaggccgccaccatgcgcgagcggcgc
cgcttgagcaaagtcaacgaggccttcgagactctcaagcgctgcacgtctagcaacccg
aatcagcggctgcccaaggtggaaatcctgcgcaacgccatccgctatatcgaaggcctg
caggcgctgcttcgcgaccaggacgccgccccccctggcgctgcagcggccttttacgcg
cctggcccgctgcccccgggccgaggcggagagcactacagcggtgactcagacgcatcc
agcccgcgctccaactgttccgacggcatgatggattatagcggccccccgagcggtgcc
cggcggcggaactgctacgacggcacctattacagcgaggcgcccagcgaaccccggccc
gggaagaatgctgcggtgtcgagcctcgactgtctgtccagcatcgtggagagcatctcc
accgagagccccgccgcgcccgcgcttctgctggcggacacgccgcgggagtcgtctccg
ggcccgcaagaggcggccgccgggagcgaggtcgagcgcggcacccccaccccttccccg
gacgccgccccgcagtgccccgcgagcgcgaaccccaaccctatctaccaggtgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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