KEGG   Sus scrofa (pig): 414371
Entry
414371            CDS       T01009                                 
Symbol
CCR5
Name
(RefSeq) C-C chemokine receptor type 5
  KO
K04180  C-C chemokine receptor type 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03250  Viral life cycle - HIV-1
ssc03260  Virion - Human immunodeficiency virus
ssc04060  Cytokine-cytokine receptor interaction
ssc04061  Viral protein interaction with cytokine and cytokine receptor
ssc04062  Chemokine signaling pathway
ssc04144  Endocytosis
ssc05145  Toxoplasmosis
ssc05163  Human cytomegalovirus infection
ssc05167  Kaposi sarcoma-associated herpesvirus infection
ssc05170  Human immunodeficiency virus 1 infection
ssc05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    414371 (CCR5)
   03260 Virion - Human immunodeficiency virus
    414371 (CCR5)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    414371 (CCR5)
   04061 Viral protein interaction with cytokine and cytokine receptor
    414371 (CCR5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    414371 (CCR5)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    414371 (CCR5)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    414371 (CCR5)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    414371 (CCR5)
   05163 Human cytomegalovirus infection
    414371 (CCR5)
   05167 Kaposi sarcoma-associated herpesvirus infection
    414371 (CCR5)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    414371 (CCR5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ssc04030]
    414371 (CCR5)
   04050 Cytokine receptors [BR:ssc04050]
    414371 (CCR5)
   04090 CD molecules [BR:ssc04090]
    414371 (CCR5)
G protein-coupled receptors [BR:ssc04030]
 Rhodopsin family
  Chemokine
   CC Chemokine
    414371 (CCR5)
Cytokine receptors [BR:ssc04050]
 Chemokine receptors
  CC Chemokine
   414371 (CCR5)
CD molecules [BR:ssc04090]
 Proteins
  414371 (CCR5)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srab DUF5073
Other DBs
NCBI-GeneID: 414371
NCBI-ProteinID: NP_001001618
Ensembl: ENSSSCG00000024344
UniProt: A0A4X1TA26 Q6YT41
Position
13:29382383..29387902
AA seq 352 aa
MDYQTTSPFYDIDYGMSEPCQKTNVRQIAARLLPPLYSLVFIFGFVGNLLVVLILINCKK
LKSMTDIYLLNLAISDLLFLFTIPFWAHYAADQWVFGNTMCQFLTGFYFIGFFSGIFFII
LLTIDRYLAIVHAVFALKARTVTFGVVTSGVTWVVAIFASLPGIIFTKSQKEGSRYTCSP
HFPSSQYHFWKNFQTLKMVILGLVLPLLVMVVCYSGILKTLLRCRNEKKKHKAVRLIFAI
MIVYFLFWAPYNIVLLLSTFQEFFGLNNCSGSNRLDQAMQVTETLGMTHCCINPIIYAFV
GEKFRSYLLGFFRKHIVRRFCKGCPVFQAEAPDRVSSVYTRSTGEQEISVGL
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggattatcaaacgacgagtcccttctatgacattgattatgggatgtcagagccctgc
caaaaaaccaatgtgagacaaattgcagcccggctcctgcccccactctactcactggtg
ttcatcttcgggtttgtgggcaacttgctggttgtcctcatcctgatcaactgcaaaaag
ctgaagagcatgactgacatctacctgctcaacctggccatctcggacctgctgttcctc
ttcaccatcccgttctgggctcactatgctgcagaccagtgggtctttggaaatacaatg
tgccaatttctgacagggttctatttcataggcttcttttctggaatcttcttcatcatc
ctcctgacaatcgacaggtacctggctatcgtccacgctgtgttcgctttaaaagccagg
acggtcaccttcggggtggtgacgagtggggtcacttgggtggtagctatctttgcctcc
ctcccaggcatcatctttaccaaatcccaaaaggagggttctcgttatacatgcagccct
cactttccatccagtcagtatcacttctggaagaatttccaaacattaaagatggtcatc
ttggggctggtcctgccactgctcgtcatggtcgtctgctactcgggaatcctcaaaacc
ctgcttcggtgccgcaatgagaagaagaagcacaaggctgtgaggctcatcttcgccatc
atgattgtctactttctcttctgggctccctacaacatcgtccttctcctgagcaccttc
caggaattctttggcctgaataactgcagtgggtctaacaggctggaccaagccatgcag
gtgaccgagaccctggggatgacacactgctgcatcaaccccatcatctacgccttcgtc
ggggagaagttccgaagctacctcttagggttcttccgaaagcacatcgtcagacgcttc
tgcaaaggctgtccagtcttccaggcagaggctccagatcgagtcagctccgtttacaca
cggtccacaggggagcaggaaatctctgtcggcttgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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