KEGG   Sus scrofa (pig): 414736
Entry
414736            CDS       T01009                                 
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X7
  KO
K16498  protocadherin delta 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssc01009]
    414736 (PCDH11X)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    414736 (PCDH11X)
Protein phosphatases and associated proteins [BR:ssc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     414736 (PCDH11X)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Protocadherins
   414736 (PCDH11X)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_3 DUF6377 ROH1-like Adeno_E3_CR2 LYRIC DUF2613 Shisa EphA2_TM
Other DBs
NCBI-GeneID: 414736
NCBI-ProteinID: XP_005673835
Ensembl: ENSSSCG00000029771
UniProt: A0A4X1W5L0 A0A287BLB8
Position
X:74462811..75191930
AA seq 1026 aa
MDLLSGTYIFAVLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYHLIK
GQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLF
HLNSTTGLITIKEPLDREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVSCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNS
PGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVILSILDANDDFTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVT
INVVDVNDNKPVFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNT
KGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQPDSLFNVVNVNLFVNESVTNAT
LIYELVRKNIETPVTQNIETTDASSPSSDYVKIVVAIVAGTITVILVIFITAVVRCQQSP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHAPKNLLLNFVTIEEAKADDADNN
RSSITLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPTFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPTDSRTPTI
EIYSEI
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcatcgtatttcaa
tctggcgcccaggagaagaactacactatccgggaagaaatgccagaaaacgtcctaata
ggcgacttgctgaaagacctcaacttgtcgctaattccagacaggtccctaacaactcct
atgcagttcaagctagtgtataagactggggatgtgccactgattcgaattgaagagggt
actggtgagatcttcactactggagctcgcattgatcgtgagaaattatgtgctggtatc
gtggtggatgctcattgcttttatgaggtggaggtcgccgttctgcctgatgaaatattt
agactggttaagatacgttttctgatagaagatataaatgataatgcacctttattccca
gcaacagttatcaacatatcaattccagagaactcggctataaattctcggtatgctctc
ccagcggccattgatcctgacacaggaataaacggagttcaaaactatcatctaattaag
ggtcaaagtatttttgggcttgatgtcattgaaacaccagaaggagagaagatgccacag
ctgatagttcaaaaggagttagacagggaagagaaagatacatatgtaatgaaaataaag
gttgaagatggtggctttcctcaaagatccagtactgctattttgcaagtaagtgttgct
gatacaaatgataaccgcccagtcttcaaggagaatgaaattgaagtcagtataccagaa
aatgctcctgtaggttcttcagtgacacagctccatgccacagatgccgacataggtgaa
aacgccaagattcacttctatttcagcaatctaatctccaacatggccaagaagctgttc
cacctcaactccactactggacttataacaattaaagaaccactggatagggaggaatca
ccaaatcacaaattacttgttttagcaagtgatggtggattgacgccagcaagagcaatg
gtgctagtcaatgttacagatatcaatgataatatcccatcaattgacataagatacatc
atcaatcccatcaatggcactgtggttctttcagaaaacgctccactcaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgtcatgctttaca
gaccatgaggtccctttcagattaaggccagtattcagtaatcagttccttctagagact
gctgcatatcttgattatgagtccacaagagaatatgccattaaattactggctgcagat
gctggcaaacctcctttgaatcagtcatccatgctcctcatcaaagtaaaagatgaaaat
gacaatgctccagttttcactcagcctttcctaagtctttctgttcctgagaataactct
cctggcacccaattgacaaaaataagtgcaatggatgcagacagtgggcgtaatgctgag
ataaattacctgctaggctttgatgctccatctgaattcaacttggatcatcgtacaggc
attctgaccgcagtgaagaaactggatagagaaaaacaggaaaaatattcattcacagtt
ctagcaaaagataatgggatgccacctttaatgaccaatgccacggtccttgtgactgtt
cttgatcagaatgacaacagtccagttttcacgcacaatgagtacaacttctatgttcca
gaaaaccttccaagacatggcacagtaggactaatcacagtaactgatcctgattatgga
gaaaattctgcagtcattctctccattttagatgcaaatgatgacttcaccattgatcca
caaactggtgtcatccaaccaaatatctcatttgatagagaaaaacaggaatcttatact
ttctatgtaaaagctgaggatggtggtaggatatcacgttcttcaactgccaaagtcacc
ataaatgtggttgatgttaatgacaacaaaccagtttttgttgtcccgtcttccaactac
tcttttgaactggttccaccatccactaatccaggtacagtggtcttcacagtagttgct
attgacaatgacactggcatgaatgcagagcttcgttatagcatggtaggaggaaacaca
aaaggtctatttataattgaccaaacttcaggcaacattacactgaaggagaaatgtgtc
tttgcagaccttggtttacacagattggtagtcaaagctaaggacttaggacaacctgat
tctctcttcaatgttgtaaatgtcaatctatttgtgaatgagtcagtgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
actgatgcatcctcaccatccagtgactatgtcaagatagtggttgccattgtggctggc
accataactgtcatccttgttattttcatcactgctgtagtaagatgccagcaatcacca
caccttaaggctgctcagaaaaacaagcagaattctgaatgggttactccaaacccagaa
aacaggcagatgataatgatgaagaaaaagaagaagaagaagaagaagcatgcacctaag
aacttgctgcttaactttgtcactatcgaagaagctaaggcggatgatgctgacaacaat
agaagcagcatcacactagaccttcccattgagctggaagagcaaaccatgggcaagtac
aactggggcactacacctactactttcaagcctgacagccccgatttggcccggcactac
aaatctgcctctccacagcctaccttccagatccagccagaaactcccctgaattcgaag
caccacatcatccaggaactgcctcttgataacaccttcgtgggctgtgattccatctcc
aagtgttcctccagcagttctgatccctacagtgtttctgagtgcagctatccagtgaca
actttcaagacccctgtgtctgtgcacaccagaccgactgattccaggacaccaactatt
gaaatctacagtgagatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (20)   
   RefSeq(nuc) (10)   
   GenBank (5)   
   EMBL (5)   
Protein domain (11)   
   Pfam (11)   
All databases (57)   

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