KEGG   Sus scrofa (pig): 492279
Entry
492279            CDS       T01009                                 
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
ssc04940  Type I diabetes mellitus
ssc05134  Legionellosis
ssc05152  Tuberculosis
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    492279 (HSPD1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    492279 (HSPD1)
   05152 Tuberculosis
    492279 (HSPD1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    492279 (HSPD1)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    492279 (HSPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    492279 (HSPD1)
   03110 Chaperones and folding catalysts [BR:ssc03110]
    492279 (HSPD1)
   03029 Mitochondrial biogenesis [BR:ssc03029]
    492279 (HSPD1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    492279 (HSPD1)
Enzymes [BR:ssc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     492279 (HSPD1)
Messenger RNA biogenesis [BR:ssc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     492279 (HSPD1)
Chaperones and folding catalysts [BR:ssc03110]
 Heat shock proteins
  HSP60 / Chaperonin
   492279 (HSPD1)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    492279 (HSPD1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   492279 (HSPD1)
  Exosomal proteins of other body fluids (saliva and urine)
   492279 (HSPD1)
  Exosomal proteins of breast cancer cells
   492279 (HSPD1)
  Exosomal proteins of colorectal cancer cells
   492279 (HSPD1)
  Exosomal proteins of bladder cancer cells
   492279 (HSPD1)
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-GeneID: 492279
NCBI-ProteinID: NP_001241645
Ensembl: ENSSSCG00000016077
UniProt: G9F6X6
Position
15:complement(101360355..101373498)
AA seq 573 aa
MLRLPAVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
CSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKLYRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKG
KGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALESITPANEDQKIGLEIIKKALKIPAMTIA
KNAGVEGSLIVEKILQSSPEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEVVVTEIPKEEKDPGMGGMGGMGGGMGGGMF
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgcttcgattacccgcagtccttcgtcagattaggccggtgtccagggcactggctcct
catctcactcgggcttatgccaaagatgtaaaatttggtgcagatgctcgagccttaatg
cttcaaggtgtagatcttttagcggatgctgtagccgttactatggggccaaagggaagg
acggtgataattgaacagagttggggcagtcccaaagtgacaaaagatggtgtgactgtt
gcaaagtccattgacttaaaagataaatataaaaatattggcgctaaacttgtgcaagat
gttgccaataacacaaacgaagaggctggggatggcaccactactgctactgtattggca
tgctctattgccaaggaaggcttcgagaagattagcaaaggtgctaatccagtggaaatc
aggagaggtgtgatgttagctgttgatgctgtaattgctgaacttaagaagcagtctaaa
cctgtgacaacccctgaagagattgcccaggttgctacaatttctgcaaatggagacaaa
gaaattggcaacatcatttctgatgcaatgaagaaggttggaagaaagggcgttataaca
gtaaaggacggaaaaacactgaatgatgaattagagattatagaaggcatgaagttgtat
agaggttatatttctccatactttattaatacatcaaaaggtcagaaatgtgaattccaa
gatgcctatgttttattgagtgaaaagaaaatttctagtgtccagtccattgttcctgct
cttgaaattgccaatgctcaccgtaagcccttggtcataattgctgaagatgttgatgga
gaagctttaagtacacttgttttgaataggttgaaagttggtcttcaggttgtagcagtc
aaagctccaggttttggtgacaatagaaagaaccaacttaaagacatggccattgctact
ggtggtgcagtatttggagaagaaggactgaccctaaatcttgaagatgttcagcctcat
gacttagggaaagttggagaggtcattgtgaccaaagatgatgccatgctcttgaaagga
aaaggtgacaaggctcaaattgaaaagcgtattcaagaaatcattgagcagttagatgtc
acaactagtgaatatgaaaaggaaaaactgaatgaacgtctggcaaaactctcagatggt
gtagctgtgctgaaggttggtgggactagtgatgttgaagtgaatgaaaagaaagacaga
gttacagatgccctgaatgcgacaagagctgctgttgaagaaggcatcgttctgggaggg
ggctgtgccttgcttcggtgcattccagccttggagtcaataactccagctaatgaagat
caaaaaattggcttagaaattattaaaaaagcactcaaaattcctgcaatgaccattgct
aagaatgcaggtgttgaaggatcattgatagttgagaaaattttgcagagttctccagaa
gttggttatgatgctatgcttggagattttgtgaacatggtggaaaaaggcatcattgat
ccaactaaggttgtaagaactgcattactggatgctgccggagtggcctctcttttaact
acagcagaagttgtagtcacagaaattcctaaagaagagaaggatcctggaatgggtgga
atgggaggaatgggaggtggtatgggaggtggcatgttctaa

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