KEGG   Sus scrofa (pig): 494564
Entry
494564            CDS       T01009                                 
Name
(RefSeq) medium-wave-sensitive opsin
  KO
K04251  long/medium wavelength-sensitive opsin
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ssc04030]
    494564
G protein-coupled receptors [BR:ssc04030]
 Rhodopsin family
  Vision
   Opsin
    494564
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srt DUF1980
Other DBs
NCBI-GeneID: 494564
NCBI-ProteinID: NP_001011506
UniProt: Q5IR81 A0A4X1TI82
Position
X:124816014..124828225
AA seq 364 aa
MAQQWGPRRLAGGQPQASFEDSTQGSIFTYTNANSTRDPFEGPNYHIAPRWVYHITSAWM
VFVVIASVFTNGLVLAATMRFKKLRHPLNWILVNLAIADLAETIIASTISVVNQMYGYFV
LGHPLCVVEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIAGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMITCCFIPLGVIVLCYL
QVWLAIRAVAKQQKESESTQKAEKEVTRMVMVMIFAYCLCWGPYTFFACFAAAHPGYAFH
PLVAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSVSKTEASSVSS
VSPA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggcccagcagtggggcccccgaaggctcgcaggtgggcagccgcaggccagctttgag
gacagcacccaggggagcatcttcacctacaccaacgccaacagcacccgagaccccttc
gaaggccccaactaccacatcgctcccagatgggtgtaccacatcaccagcgcctggatg
gtcttcgtcgtcatcgcatccgtcttcaccaacgggcttgtgctggcggccaccatgagg
ttcaagaagctgcgccaccctctgaactggatcctggtgaacttggccatcgctgacctg
gcagagaccatcatcgccagcaccatcagcgtcgtgaaccagatgtacggctacttcgtg
ctgggccaccccttgtgcgtggtggagggctacacggtctccttgtgtgggatcacgggt
ctctggtccctggccatcatttcctgggagagatggatggtggtctgcaagcccttcggc
aacgtgcgatttgacgccaagctggccattgctggcatcgccttctcctggatctgggct
gccgtgtggacggccccacccatctttggttggagcaggtactggccccacggcctgaag
acgtcctgcggccccgacgtgttcagcggcagctcttaccccggggtgcagtcttacatg
attgtgctcatgatcacgtgctgcttcatcccgctcggcgtcatcgtgctctgctacctg
caagtgtggctggccatccgcgcggtggcgaagcagcagaaggaatccgagtcgacccag
aaggccgagaaggaggtgacacgcatggtgatggtgatgatcttcgcctactgcctctgc
tgggggccttacactttcttcgcctgcttcgcggctgcccaccccggctacgccttccac
ccgctggtggccgccctgccagcctactttgccaaaagtgccactatctacaaccctatt
atctatgtcttcatgaacaggcagtttcgaaactgcatcttgcagctttttgggaagaag
gtggacgatagctctgagctctccagtgtttccaaaacagaggcctcgtctgtctcttca
gtgtcacctgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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