KEGG   Sus scrofa (pig): 733630
Entry
733630            CDS       T01009                                 
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor precursor
  KO
K20053  very low-density lipoprotein receptor
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05017  Spinocerebellar ataxia
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    733630 (VLDLR)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    733630 (VLDLR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    733630 (VLDLR)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    733630 (VLDLR)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF hEGF
Other DBs
NCBI-GeneID: 733630
NCBI-ProteinID: NP_001186819
Ensembl: ENSSSCG00000005229
UniProt: E7CXS1 A0A8D1YMR3
Position
1:complement(219178501..219210332)
AA seq 845 aa
MGTSARWALWLLLVLCLAPRESGATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCSNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGSKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRALVTTDIQ
WPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYRLEDSGRECQRINVTTAVSEISVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgtgctgtgcttggcgccccga
gaaagcggcgccactggagcgggaagaaaagccaaatgtgagccttcccaattccagtgc
acaaatggccgctgtatcacgctgttgtggaaatgcgatggggatgaagactgtgctgat
ggcagtgacgaaaagaactgtgtgaagaagacgtgtgccgagtctgactttgtctgcagc
aatggccagtgtgttcccaaccgatggcagtgtgacggggatcctgactgtgaagatggc
tctgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttccactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacatcacgtgtagccccgacgagttcact
tgttctagtggccgctgcatctccaggaatttcgtctgcaatggccaggatgactgtagc
gacggcagcgatgagctggactgtgccccaccgacctgtggggcccacgagttccagtgt
agcacttcctcctgcatccccatcagctgggtgtgtgacgatgacgcggactgctcagac
cagtcggatgagtccctcgagcagtgcggccgccaaccagtgatccacaccaagtgccca
gccagcgagatccagtgcggctccggcgaatgcatccataagaagtggcggtgcgatggg
gatcccgactgtaaagatggcagcgatgaggtcaactgtccttctcgaacctgccgacct
gaccagtttgagtgtgaggatgggagctgcatccatggcagcaggcagtgcaacggcatc
cgagactgtgtggatggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggt
ccagggaagttcaagtgcaggagcggggaatgcatagacatcagtaaagtgtgtaaccag
gagcaagactgcagggactggagtgatgagcccctcaaagaatgtcatgtaaatgaatgc
ttggttaacaatggtggatgttcccatatctgcaaagacctggtgataggctacgaatgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgacgagtgc
caaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatagaagagacatcaggaagattggcttagagagaaaagaa
tatatccaactagttgaacaactaagaaacactgtggctcttgatgctgacattgctgct
cagaaactattctgggctgatctaagccaaaaggccattttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
acccttgatggaagcaagaggaagttcctgtttaattcagacttacgcgagcctgcttcc
atagctgtggacccattgtctggctttgtttactggtcagactggggtgaaccagctaaa
atcgaaaaagcaggaatgaatggatttgatagacgggcgctggtgacaacagacatccag
tggcctaacggaattacacttgatcttataaagggccgcctctattggctggattccaaa
ttgcacatgttatccagtgtggacttgaacggccaagatcggaggattgtcctgaagtct
ctggagttcctagctcacccccttgcgctaacgatatttgaggatcgtgtctactggata
gatggggaaaatgaagcagtctatggtgccaataaattcactggatcggagctggccact
ctagttaacaaccttaatgatgcccaagacatcattgtctatcatgaacttgtccagcca
tcaggtaaaaattggtgtgaagaagacatggagaatggaggctgtgaatacctctgcctg
ccagcaccgcagatcaatgaccactccccaaaatacacctgctcctgtcccaatggatac
cggctagaggacagtggccgggagtgccaaaggatcaatgtgaccacagcagtatcggag
ataagtgttcccccaaaagggacttctgctgcctgggccatccttcctctcctgctctta
gcaatggcagcagtaggtggctacctgatgtggcggaactggcaacacaagaacatgaaa
agcatgaattttgataatcctgtgtacttgaagaccactgaagaggacctgtcaatagac
attggtagacacagtgcttctgttggacatacgtacccagcaatatcagttgtaagcaca
gatgatgacctagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (2)   
   RefSeq(pep) (8)   
DNA sequence (18)   
   RefSeq(nuc) (8)   
   GenBank (5)   
   EMBL (5)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

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