KEGG   Synechocystis sp. PCC 6803: slr0457
Entry
slr0457           CDS       T00004                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
syn  Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:syn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syn03016]
    slr0457 (truB)
Enzymes [BR:syn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     slr0457 (truB)
Transfer RNA biogenesis [BR:syn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    slr0457 (truB)
 Prokaryotic type
    slr0457 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: BAA18814
CyanoBase: slr0457
UniProt: P74696
Position
3508111..3509001
AA seq 296 aa
MFGFLNLHKPLHLTSHDCVAKVRRLLRQKRVGHGGTLDPLAEGVLPLAVGSATRLLPYLP
GAKQYQALIRFGVRTDSDDLAGEVLESKNVSYLTLAAVEQILPTFLGEIEQIPPQYSAIQ
VNGKRLYELARAGIPQAVPSRMVTINDLKILGWRSGNQPELDLQVTCGEGTYIRALARDL
GDRLGTGATLAGLVRQQSGGMALDNSVGLTALEKIVAEEEHIPLIPPQEALSHLPTVQLN
SELEKRWFHGQRLLLPDLPVGVVLITSELGPVKCLGVALVTPEDHGTVLRPKVVLN
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtttggtttcctcaatctccataaacctctgcacctcacttcccatgattgtgtggcc
aaggtgcgtcgtctattaaggcaaaaacgggtggggcacggaggcaccctagatcctttg
gcggagggagtattgcccctggcggtggggtcggctacccgtttactgccctacttacct
ggggcaaagcaatatcaagcccttattcgctttggggtacgtaccgacagcgatgaccta
gctggggaggtattagagagtaaaaatgttagttatttaacccttgccgccgttgaacag
attttaccgacttttttgggggaaattgagcaaattccccctcaatacagcgctattcag
gttaatggtaagcgtttgtatgaattggccagggctggcattccccaagcagtgcccagt
cgcatggtgactattaatgatttgaaaatactcggttggcgatcggggaatcagccggaa
ttagatttacaagttacctgtggggaaggaacctacattcgagccttagccagggacctt
ggcgatcgcctgggaacaggggcaacgttggcgggcttggtacggcaacagagtgggggc
atggccctggataatagcgttggtttaaccgccctggaaaaaatcgtggcggaggaggag
catattcctctcattcctccccaggaagcgttaagccatttacccacagttcaactgaat
agcgaattggaaaaaaggtggttccacggccaaagattgctcttgccagatctacccgtg
ggagtggtactaatcacatcggagctaggcccagtaaaatgcttgggcgttgccctggtg
actccagaagaccatggcacggtgttacggccaaaagttgtgctgaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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