KEGG   Synechocystis sp. PCC 6803: slr0335
Entry
slr0335           CDS       T00004                                 
Symbol
apcE
Name
(GenBank) phycobilisome LCM core-membrane linker polypeptide
  KO
K02096  phycobilisome core-membrane linker protein
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn00196  Photosynthesis - antenna proteins
syn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:syn00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    slr0335 (apcE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:syn00194]
    slr0335 (apcE)
Photosynthesis proteins [BR:syn00194]
 Antenna proteins
  Phycobilisome - Cyanobacteria, Red alga [OT]
   Allophycocyanin (AP)
    slr0335 (apcE)
SSDB
Motif
Pfam: PBS_linker_poly Phycobilisome CTP_transf_3
Other DBs
NCBI-ProteinID: BAA10042
CyanoBase: slr0335
UniProt: Q55544
Structure
Position
2292188..2294878
AA seq 896 aa
MSVKASGGSSLARPQLYQTVPVSAISQAEQQDRFLEGSELNELTAYFQSGALRLEIAETL
TQNADLIVSRAANRIFTGGSPLSYLEKPVERQPALVGASSDSRNGSVTYAESNGSGGLFG
GLRSVFSSTGPIPPGFRPINIARYGPSNMQKSLRDMSWFLRYTTYAIVAGDPNIIVVNTR
GLKEVIENACSIDATIVAIQEMRAASADYFRNNAQAKEIVLQYFDILLSEFKAPTPANKV
RQGPSNDIQGLELPQSYFNAAAKRQKYAMKPGLSALEKNAVIKAAYRQIFERDITKAYSQ
SISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREE
VQKYFSIVSSGGLPALVDALVDSQEYADYFGEETVPYLRGLGVEAQECRNWGMQQDLFSY
SAPFRKVPQFITTFAQYDRPLPDQHVYGSGNDPLEIQFGAIFPKETRNPSKRPAPFNKDT
KRILIHRGPAVNNQVGNPSAVGEFPGSLGAKVFRLNGGLPGAKVGKNTGTSVKFGESSTQ
ALIRAAYRQVFGRDLYEGQRLSVAEIQLENGDISVREFIKRLAKSELFLKLYWAPHYVCK
AIEYMHRRLLGRPTYGRQEMNQYFDIASKQGFYAVVEAMIDSKEYSDAFGEDTVPYERYL
TPGGLQMRSARVGSLREDIGQRVDKEVTPRFVELGQVSAIRTEPEIAYRSNQGVTRQRQQ
TKVFKLVSTYDKVAVKNAIRAAYRQVFERDLEPYIINSEFTALESKLSNNEINVKEFIEG
LGTSELYMKEFYAPYPNTKVIEMGTKHFLGRAPLNQKEIQQYNQILASQGLKAFIGAMVN
GMEYLQTFGEDTVPYRRFPTLPAANFPNTERLYNKLTKQDKELVVPSFTPVVKVGG
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgagtgttaaggcaagtggtggcagctcactagcgcgaccccaactctaccaaaccgtt
cccgtctccgctatcagccaagcagagcaacaggatcgcttcctagaagggtcagaacta
aacgagttaacagcgtattttcagtccggtgccctgcgtctagagattgcagagacccta
acccaaaatgccgacttgatcgtctctagggccgccaatcgaattttcaccggcggttcc
cccctctcctacctggaaaagcccgttgagcgtcaacctgcattggtgggtgcctccagt
gatagtcgcaatggcagtgttacctatgccgaaagcaatggaagcggtggtctctttggg
ggactccgttctgtttttagcagtactggccccattccccctggtttccgtcccattaac
attgcccggtacggtcccagcaacatgcaaaaatctctccgggacatgtcctggtttttg
cgctacaccacctatgccattgtggccggggaccccaacatcattgtggtcaataccagg
ggtttgaaggaagtcattgaaaatgcctgttccatcgatgccaccattgtcgccatccag
gaaatgcgggctgcttccgccgattatttccgcaacaatgcccaggctaaagagattgtt
ctgcaatacttcgacattctcctgagcgaatttaaagcccccaccccagccaataaagtt
cgccagggcccttccaatgatatccaaggtttagagctaccccagagctatttcaatgcc
gccgctaaacggcagaaatacgccatgaagcccggtttgtccgccctggaaaaaaatgcg
gtcatcaaggcagcctaccggcaaatttttgagcgggacattaccaaagcctacagccaa
tccatttcttatctggaatcccaggtacgcaatggcgacatttccatgaaggaatttgtc
cgtcgtttggctaaatctcccctctaccgcaagcaattctttgaacccttcatcaacagc
agggctctagaattggctttccgccatatccttggtcggggacccagctcccgggaagaa
gtgcaaaaatacttttccatcgtttctagtggtggccttcccgccctggtggatgcgttg
gtcgattcccaggaatatgccgattactttggggaagaaacagtgccctatctgcggggt
ctaggggtagaagcccaggaatgccgcaactgggggatgcaacaagatctctttagctac
agcgctcctttccgcaaagttccccagttcatcaccacctttgcccagtacgatcgcccg
ttaccggatcaacacgtctatggttccggcaacgaccccctggaaattcaatttggggcc
attttcccgaaagaaacccgcaatcctagcaaacgacctgctccctttaacaaagacacc
aaacggattctcatccaccggggcccggcggttaataaccaagtaggcaatcccagtgct
gtgggcgaatttcccggtagtttgggggcgaaagtgttccgtctcaatggcggtttaccc
ggtgccaaagtgggcaaaaataccggcaccagcgtcaaatttggtgaaagctccacccag
gctttgattcgggctgcctaccgtcaagtgtttggtcgggatctgtacgaagggcaacgg
ctctccgtggcggaaattcaactggaaaatggcgacattagcgtgcgggaatttatcaag
cgtctagctaaatcggaactgttcctcaagctttactgggctccccactacgtctgtaag
gcgatcgaatatatgcaccgtcgcctgctgggtcgtcccacctacggccgccaggaaatg
aatcaatatttcgacattgcttctaaacagggtttctatgctgtggtggaagcgatgatt
gatagcaaagaatacagcgatgcctttggggaagacaccgttccctacgagcgttacctc
acccccggtggtctacaaatgcgttccgcccgggttggttccctgcgggaagacattggt
caacgggtggataaggaagttactccccgctttgtggaattgggccaggtttcggccatc
cgcactgagccggaaattgcctaccgcagcaaccaaggggttacccgtcaacggcaacaa
accaaagtctttaagctggtgtccacctacgataaggttgcggttaaaaatgccatccgg
gccgcctaccgtcaggtgtttgagcgggatttggaaccttacatcatcaattccgagttc
actgccctggaaagtaagctcagcaacaatgaaattaacgttaaggaattcattgaaggt
ttaggcacttccgagctctatatgaaggagttctatgccccctatcccaacaccaaagtg
attgaaatgggtaccaagcacttcctcggtcgggctcccctcaatcaaaaggaaatccag
cagtataaccaaattttggccagccaagggctaaaggccttcatcggggctatggtcaac
ggcatggaatatctgcaaacctttggtgaagatacggtgccctaccgtcgtttccccacc
ctaccggcggctaacttccccaatacggaacggctttataacaagctcaccaaacaggat
aaggagttagtggttcccagctttaccccagtagtaaaagtgggcggttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (8)   
   PDB (8)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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