KEGG   Tribolium castaneum (red flour beetle): 655772
Entry
655772            CDS       T01046                                 
Symbol
hif1a, sima, similar
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca04137  Mitophagy - animal
tca04140  Autophagy - animal
tca04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tca00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    655772 (hif1a)
   04137 Mitophagy - animal
    655772 (hif1a)
   04148 Efferocytosis
    655772 (hif1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tca03000]
    655772 (hif1a)
Transcription factors [BR:tca03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    655772 (hif1a)
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS PAS_9 HIF-1a_CTAD PAS_4 HLH PAS_2
Other DBs
NCBI-GeneID: 655772
NCBI-ProteinID: XP_015835862
Position
LG5:complement(11622592..11650381)
AA seq 895 aa
MKNFSTFNVTNRQLTKMECSTFPQDGVAVQQTSQMSPYLGNVNCATSYGLNNATLEPIPN
RHNSRIRPNGLLARMALPCQSSSNWDYTECYSYYADGCYNTCQFVEFGDIEDFMNNEKRK
EKSRDAARSRRSKETEVFTDLGNALPISQEQVSQLDKASVMRLAIAYLRVRDMITLVPEA
PEPDDHKILTDESIFLKALEGFLLVMSSEGDIVYMSENVSEYLGITQIDLMGQNIFEYSH
PCDHDEIKEILSTKTREETETPKSFFIRLKCTLTSKGRSVNLKSATYKVIHCTGHIVQTE
DDGNEENAKGTLRRCLVAIGQPIPHPSNIEAPLPRQTFLTKHSLDMKFTHADDKIMMDVL
GYDSEDLVGKSVYDYHHAMDSDAICSAFKCLFSKGQCETNRYRFLAKTGGYVWVLTQATL
INDNKTMKPQSVVCVNYVISGVECKDEIYSSSQLASVKTENLCNNENLPVLVEKVTPEAT
PAKKPELNNAKKVISSYVDNSTKPPLTATSKIFAPRTKEMNKGFLMFSDEEPGLTMLKDE
PDDLTHLAPVAGDVCVPLDDHPFLTDKMLDDFLLRDNFEPLLTDEPTDPFISYRDSYDNS
PQLLSPNLSKNSECSLPSLNSPSDSLSDEDRLSTFMNLHTEDESDLVAKAPYITMNMGDD
LPLLMSDDLMWSSSEKSRASPDSSSSLAQLLCSSINKHSRPNDHGGGLISPDRLMDVDEY
YNKKNSAMNGKSSSISSRLERTNKRSNTSNYESNTKRSRNEPKEKMSSELLQQLMSTNHH
RGRPKGKSNWLLDSGGQKAACISQPSDSVLMNLLDDPMDRTSVKRDKGRPPGPPDDARAR
QNTIRKNSLSLLDPDATIPSLLDLTQQDFEVNAPVNSLLLQGTDLLTALDINGPI
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgaaaaatttctccacttttaacgtcactaatcgacagttaactaaaatggagtgtagt
acttttccacaagacggtgtcgcggttcaacaaacttcacaaatgagcccttacttggga
aatgtgaattgtgcgaccagttatggattaaataatgcaacccttgaaccgattccaaat
cgacataacagtcggattagacctaatggtctcctggctcgcatggccttaccgtgccag
tcgtcctccaattgggattatacagagtgttatagttattatgcagatgggtgctataac
acttgccagtttgttgaatttggtgatattgaagacttcatgaataatgagaaacgtaag
gaaaaatccagagatgcggcgcgatctcgtcgctccaaagaaaccgaagtttttaccgac
ttgggtaacgctctgccaatttcacaagaacaggtttcgcaattggataaagcttccgtt
atgagattggccattgcatatctgcgggtgcgggatatgatcactttggtcccggaagcc
ccggagcccgacgaccacaaaattttaaccgatgaatcaattttcttgaaagcattagag
gggtttttactggtgatgtcttcagagggagacattgtttacatgtctgagaatgtcagc
gagtatcttggaattacacagattgatctgatgggtcagaatatttttgagtacagtcat
ccgtgcgatcatgacgaaatcaaggaaattttatcaacaaagacccgggaagaaacagag
acgcctaagtcgttttttatcaggcttaagtgtactcttacaagcaaaggccgatcggtc
aatctcaaatcagcgacttacaaggtcatccattgcactggtcacatagtgcaaactgaa
gatgacggaaatgaagaaaatgcgaaaggaactttgcgccgatgtcttgtggcaatagga
caacctattccgcatccttccaacatcgaagccccattaccacgtcaaacattcttaaca
aaacacagtttggatatgaaatttacgcacgctgacgataaaataatgatggatgttttg
ggatacgattcggaagatttggtcgggaaatcggtttatgactatcaccatgccatggat
agtgacgcgatttgttcagctttcaagtgtttattttccaaaggacagtgtgagaccaat
cggtaccgtttccttgcaaaaactgggggctacgtctgggtcctcacccaagccacgttg
atcaacgacaacaagaccatgaagccccaaagtgtcgtttgcgtgaactacgtcataagt
ggtgtcgaatgtaaagatgagatttactcgtcgtcgcaattggcgtcggtaaaaacagaa
aatttgtgcaataacgagaatttacccgtacttgtggagaaagtgactccggaggcgact
ccggcgaaaaagcccgagcttaataacgccaagaaagtgatttcttcctacgtggataac
agcacgaagccaccgcttacggcgacttcgaaaattttcgccccgaggactaaagagatg
aacaagggattcctgatgttctccgatgaggagccgggactcacgatgttgaaggacgag
cctgacgatttgacgcatttggctccagtagccggcgacgtttgcgttcctctagacgat
cacccctttttaaccgacaagatgttggacgatttcttgctcagagataattttgagccg
ctgcttaccgacgaacccaccgaccctttcatttcgtacagagattcctacgataattct
ccccaattattatctccgaatctctcaaagaattcggagtgtagtttaccttcgttaaat
agtccgagcgattctctaagcgacgaggatcgtttgtcaacgttcatgaatttgcacaca
gaggacgagtcggatttggtggcgaaagccccctatatcacgatgaacatgggcgacgat
ctgcccctgctgatgtcagacgatctcatgtggagcagcagcgaaaagtcgagagcttcg
cccgacagtagctcgagtctggcacagttgttgtgctcttcgataaacaaacactcgcgt
ccgaacgatcacggcggagggttgatttcgccggatcggctcatggacgtggacgaatat
tacaacaagaaaaattcagcaatgaacggaaagtcgtcgtcgatatcgtcccggttagag
cgaacaaacaaaagatcgaacacttcaaattacgagtcaaacacaaagcggtcgcgaaac
gagcctaaagagaaaatgtcttcagagcttttgcagcagttaatgtcaaccaaccaccac
cggggccgcccgaagggcaagagcaactggttgctcgactcgggcggccagaaggcggct
tgcataagccagccgagtgacagtgtcttgatgaaccttctggatgatcccatggaccgg
acgtccgtgaaaagggacaaggggcggcccccgggcccccctgacgacgccagggcgcgc
cagaacacgatacggaagaattccctgtcgctgctcgatcccgacgcgaccataccgtca
ttactcgatttgacgcaacaggatttcgaagtgaacgcacctgtgaatagcctcctcctg
caaggcaccgatctgctgacggcgcttgacatcaacgggcccatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (82)   

Download RDF
DBGET integrated database retrieval system