KEGG   Taeniopygia guttata (zebra finch): 100190680
Entry
100190680         CDS       T01082                                 
Symbol
RAB1A
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100190680 (RAB1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100190680 (RAB1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tgu04147]
    100190680 (RAB1A)
   04031 GTP-binding proteins [BR:tgu04031]
    100190680 (RAB1A)
Membrane trafficking [BR:tgu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    100190680 (RAB1A)
 Autophagy
  Other autophagy associated proteins
    100190680 (RAB1A)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100190680 (RAB1A)
  Exosomal proteins of other body fluids (saliva and urine)
   100190680 (RAB1A)
  Exosomal proteins of colorectal cancer cells
   100190680 (RAB1A)
GTP-binding proteins [BR:tgu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    100190680 (RAB1A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA AAA_7 PduV-EutP ABC_tran AAA_29 AAA_16 Septin AAA_22 LANC_like AAA_5 TniB CRAL_TRIO_2
Other DBs
NCBI-GeneID: 100190680
NCBI-ProteinID: NP_001128655
Ensembl: ENSTGUG00000002328
UniProt: B5FZE0
Position
3:109617751..109630699
AA seq 205 aa
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
TAGGAEKSNVKIQSTPVKQSSGGCC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtccagcatgaaccccgaatatgactatttattcaagcttcttctgattggagactcc
ggtgttgggaaatcttgccttctacttaggtttgcagatgacacgtacacagaaagttac
atcagcacgattggtgtggacttcaaaatcagaactatagaactagatgggaaaacaatc
aagcttcagatatgggacacggcgggacaggagcggtttcggactatcacttccagttac
tatagaggagctcatggcatcatagttgtgtatgatgttacagatcaggagtctttcaat
aatgtcaagcagtggctgcaggagatagaccgttatgccagtgaaaacgtcaacaagttg
ttggtggggaacaagtgtgatctgaccacaaagaaagtagtagactatacaacagcaaag
gaatttgcagattctcttggaattccgtttttggaaaccagtgcaaagaatgccacaaat
gtagaacagtctttcatgaccatggctgccgagattaaaaaacgaatgggcccgggagcg
acagctggtggtgcagagaagtccaatgttaaaattcagagcactccagtcaagcagtct
agtggaggttgctgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (21)   
   Pfam (21)   
All databases (140)   

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