KEGG   Taeniopygia guttata (zebra finch): 100229514
Entry
100229514         CDS       T01082                                 
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100229514 (VPS35)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100229514 (VPS35)
Membrane trafficking [BR:tgu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    100229514 (VPS35)
SSDB
Motif
Pfam: Vps35 FerA Imm5
Other DBs
NCBI-GeneID: 100229514
NCBI-ProteinID: XP_030138505
Ensembl: ENSTGUG00000008891
Position
11:complement(7153622..7177932)
AA seq 796 aa
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtcgttccagatgaagagatgcttggacaagaacaagctcatg
gatgctctgaaacatgcttctaacatgcttggggagctgcggacttctatgttatctcca
aagagctattatgagctctacatggcaatttctgatgagctacactatttggaagtctac
ctgacagatgaatttgccaaaggcaggaaagtggcagacctttatgagctagtacagtat
gctggaaatatcattccaagactgtatctgctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagtg
cagcatcctcttagaggcctcttccttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaactactggagacatcagtgactcaatg
gattttgtgctgctgaactttgctgagatgaacaagctctgggtgcgaatgcagcaccag
ggccacagtcgggacagagagaagagggagcgagagaggcaggagctgaggatcctcgtt
ggaacaaacctggttcgcctcagtcagctggaaggggttaatgtggagagatacaagcag
attgttctgcctggaatactggagcaagttgtgaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gacatcaaactgtttgatatcttttcacagcaggttgcaacagttatacagtctcggcag
gatatgccctcagaggatgtggtgtctttgcaagtttctctcattaacctggctatgaaa
tgctacccagaccgtgtggactatgttgacaaggtgttagagactactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgactaga
cttttgaaaatcccagttgatacttacaacaatatcctgacagttctgaaactaaaacat
tttcacccactctttgaatactttgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtgttggattataacacagaaattgtgtcccaagaacaggttgatgctatc
atgaatttggtgtccacgctgatccaggatcaaccagatcagcctgctgaagatcctgac
cctgaggactttgcggatgagcagagtcttgtgggaagatttattcatctgctgcgttct
gatgaccccgaccaacagtacctgatcctcaacactgcccggaagcactttggggcaggg
gggaaccaacgcattcgtttcacgctgccgcccttggtttttgctgcctaccagctcgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcatttgctcatcaaaccatcagtgctctgatcaaagcggagctggcagagctgcct
ctccgactcttcctgcagggagcactggctgcaggagagattggctttgagaatcacgaa
actgtggcctatgagttcatgtcccaggccttctctctatatgaagatgaaatcagtgac
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggcagcctccaagctc
ctgaagaagccagaccagtgccgagctgtgagcacttgtgcccatctgttctggtctggc
cgaaacactgacaagaatggagaagagcttcatggaggaaaaagggtgatggaatgccta
aagaaggctctgaagatagcaaatcagtgcatggacccttctctgcaagtccagcttttc
atagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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