KEGG   Thermotoga maritima MSB8: TM1619
Entry
TM1619            CDS       T00022                                 
Name
(GenBank) DNA-directed DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tma  Thermotoga maritima MSB8
Pathway
tma03030  DNA replication
tma03410  Base excision repair
tma03420  Nucleotide excision repair
tma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TM1619
   03410 Base excision repair
    TM1619
   03420 Nucleotide excision repair
    TM1619
   03440 Homologous recombination
    TM1619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tma03032]
    TM1619
   03400 DNA repair and recombination proteins [BR:tma03400]
    TM1619
Enzymes [BR:tma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TM1619
DNA replication proteins [BR:tma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TM1619
DNA repair and recombination proteins [BR:tma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TM1619
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TM1619
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 Ribosomal_L12 RNase_T
Other DBs
NCBI-ProteinID: AAD36686
UniProt: Q9X1V4
Position
complement(1605698..1608379)
AA seq 893 aa
MARLFLFDGTALAYRAYYALDRSLSTSTGIPTNATYGVARMLVRFIKDHIIVGKDYVAVA
FDKKAATFRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEVEGYEADDIIATL
AVKGLPLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPQQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYKDLEDILNHVRELPQKVRKALLRDRENAI
LSKKLAILETNVPIEINWEELRYQGYDREKLLPLLKELEFASIMKELQLYEESEPVGYRI
VKDLVEFEKLIEKLRESPSFAIDLETSSLDPFDCDIVGISVSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGVEPVPPYFDTMIAAYLLEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSFPLFGFSFADVPVEKAANYSCEDADITYRLYKTLS
LKLHEADLENVFYKIEMPLVNVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILAHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPNEEKDALVELVKDRMTNVVKLSVPLEVDVTIGKTWS
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggcgagactatttctctttgatggaactgctctggcctacagagcgtactatgcgctc
gatagatcgctttctacttccaccggcattcccacaaacgccacatacggtgtggcgagg
atgctggtgagattcatcaaagaccatatcattgtcggaaaagactacgttgctgtggct
ttcgacaaaaaagctgccaccttcagacacaagctcctcgagacttacaaggctcaaaga
ccaaagactccggatctcctgattcagcagcttccgtacataaagaagctggtcgaagcc
cttggaatgaaagtgctggaggtagaaggatacgaagcggacgatataattgccactctg
gctgtgaaggggcttccgctttttgatgaaatattcatagtgaccggagataaagacatg
cttcagcttgtgaacgaaaagatcaaggtgtggcgaatcgtaaaagggatatccgatctg
gaactttacgatgcgcagaaggtgaaggaaaaatacggtgttgaaccccagcagatcccg
gatcttctggctctaaccggagatgaaatagacaacatccccggtgtaactgggataggt
gaaaagactgctgttcagcttctagagaagtacaaagacctcgaagacatactgaatcat
gttcgcgaacttcctcaaaaggtgagaaaagccctgcttcgagacagagaaaacgccatt
ctcagcaaaaagctggcgattctggaaacaaacgttcccattgaaataaactgggaagaa
cttcgctaccagggctacgacagagagaaactcttaccacttttgaaagaactggaattc
gcatccatcatgaaggaacttcaactgtacgaagagtccgaacccgttggatacagaata
gtgaaagacctagtggaatttgaaaaactcatagagaaactgagagaatccccttcgttc
gccatagatcttgagacgtcttccctcgatcctttcgactgcgacattgtcggtatctct
gtgtctttcaaaccaaaggaagcgtactacataccactccatcatagaaacgcccagaac
ctggacgaaaaagaggttctgaaaaagctcaaagaaattctggaggaccccggagcaaag
atcgttggtcagaatttgaaattcgattacaaggtgttgatggtgaagggtgttgaacct
gttcctccttacttcgacacgatgatagcggcttaccttcttgagccgaacgaaaagaag
ttcaatctggacgatctcgcattgaaatttcttggatacaaaatgacatcttaccaagag
ctcatgtccttctcttttccgctgtttggtttcagttttgccgatgttcctgtagaaaaa
gcagcgaactactcctgtgaagatgcagacatcacctacagactttacaagaccctgagc
ttaaaactccacgaggcagatctggaaaacgtgttctacaagatagaaatgccccttgtg
aacgtgcttgcacggatggaactgaacggtgtgtatgtggacacagagttcctgaagaaa
ctctcagaagagtacggaaaaaaactcgaagaactggcagaggaaatatacaggatagct
ggagagccgttcaacataaactcaccgaagcaggtttcaaggatcctttttgaaaaactc
ggcataaaaccacgtggtaaaacgacgaaaacgggagactattcaacacgcatagaagtc
ctcgaggaacttgccggtgaacacgaaatcattcctctgattcttgaatacagaaagata
cagaaattgaaatcaacctacatagacgctcttcccaagatggtcaacccaaagaccgga
aggattcatgcttctttcaatcaaacggggactgccactggaagacttagcagcagcgat
cccaatcttcagaacctcccgacgaaaagtgaagagggaaaagaaatcaggaaagcgata
gttcctcaggatccaaactggtggatcgtcagtgccgactactcccaaatagaactgagg
atcctcgcccatctcagtggtgatgagaatcttttgagggcattcgaagagggcatcgac
gtccacactctaacagcttccagaatattcaacgtgaaacccgaagaagtaaccgaagaa
atgcgccgcgctggtaaaatggttaatttttccatcatatacggtgtaacaccttacggt
ctgtctgtgaggcttggagtacctgtgaaagaagcagaaaagatgatcgtcaactacttc
gtcctctacccaaaggtgcgcgattacattcagagggtcgtatcggaagcgaaagaaaaa
ggctatgttagaacgctgtttggaagaaaaagagacataccacagctcatggcccgggac
aggaacacacaggctgaaggagaacgaattgccataaacactcccatacagggtacagca
gcggatataataaagctggctatgatagaaatagacagggaactgaaagaaagaaaaatg
agatcgaagatgatcatacaggtccacgacgaactggtttttgaagtgcccaatgaggaa
aaggacgcgctcgtcgagctggtgaaagacagaatgacgaatgtggtaaagctttcagtg
ccgctcgaagtggatgtaaccatcggcaaaacatggtcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (113)   
   KEGG ORTHOLOGY (1)   
   RefGene (110)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (131)   

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