KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0003
Entry
VP0003            CDS       T00120                                 
Name
(GenBank) inner membrane protein, 60 kDa
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02024  Quorum sensing
vpa03060  Protein export
vpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VP0003
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VP0003
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VP0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:vpa03029]
    VP0003
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP0003
Mitochondrial biogenesis [BR:vpa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    VP0003
Secretion system [BR:vpa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VP0003
SSDB
Motif
Pfam: YidC_periplas 60KD_IMP DUF2427
Other DBs
NCBI-ProteinID: BAC58266
UniProt: Q87TR5
Position
1:complement(2389..4011)
AA seq 540 aa
MDSQRNILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSSLPAPSFADELDPVPGQQQ
ASAKTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLLKDTQGHQFIAQSGLV
GPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRGSYALNVE
YDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNL
SINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNKTIATGDQAKF
EATLWVGPKLQQEMAAVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTF
IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGC
LPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFLIQKMSP
TTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKKGLHTK
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggattctcaacgtaatatcctgctcatcgctctggcactggtttctttcttgctattt
caacaatggcaagtcgcaaagaatccagcacctcaagcggttgaacaggctcaatcaagc
agcagtctacctgcaccatcttttgctgatgagctggacccagttcctggtcaacagcaa
gcttctgcaaaaactatcacagtaacgactgatgttttaactctgtcgatcgacaccgtt
ggtggcgatgtggtacatgccgacttaaaccaatactctgctgaacttgattcatcagac
ccattcgttctgctaaaagacacacaaggtcatcaattcatcgcccaaagcggtcttgtt
ggtcctcaaggtatcgatctaagcagctctaaccgtcctcactacaatgtgagcgcagac
agcttcactctagctgacggtcaagacgaactacgcgttccgatgacatttactgcaaac
ggcatcgaatacacaaaaacttacgtattaaaacgcggcagctacgcgctgaacgttgaa
tacgatgtagcgaacaactctggtaacaacgcaaccttcggtatgtacgcacacctacgt
caaaacctaatggacgctggtggtagcatcacaatgccaacctaccgtggcggtgcttac
tcaactgaagatactcgttacaaaaaatacagctttgaagatatgcaggatcgtaacctg
tctatcaacctagcagatggccaaggttgggcagcaatgatccaacactacttcgcagct
gcttggatccctcgtaacgaaccaggaactaacctttacactcgcgtaattggcaaccta
ggcgatatcggcgtacgtatgccgaacaaaacgatcgcgacgggtgaccaagcgaagttt
gaagcaacactttgggttggtcctaagctacaacaagaaatggcagcagtggcaccaaac
ctagacctagtagtggactacggctggctatggttcatcgctaaaccacttcactcactg
cttgctttcatccaaagcttcgtcggtaactggggtgtggcaatcatctgtttgaccttc
atcgttcgtggtgcaatgtacccactaacgaaagcgcaatacacgtctatggcgaaaatg
cgcatgctacagcctaagctgcaagctatgcgtgagcgtattggcgacgaccgtcaacgc
atgagccaagagatgatggaactgtacaagaaagagaaagtaaacccactgggtggctgt
cttcctcttgttctacagatgcctatcttcatcgcactatactgggcgctaatggaatcg
gttgagcttcgtcactctccattcttcggttggattcatgacctttcagcgcaggaccct
tactacatcctgccactactgatgggtgcttcaatgttcctaatccagaagatgagccca
acaaccgtaacggatccaatgcagcagaagatcatgaccttcatgccggttatgtttacc
ttcttcttcttgttcttcccatcaggcctagttctgtactggttggtgtcgaacatcgtt
actctgatccagcaaaccttgatttacaaagcgctggagaaaaaaggcttacacactaag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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